Geospiza fortis (medium ground-finch): 102034274
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Entry
102034274 CDS
T03755
Symbol
NEIL1
Name
(RefSeq) nei like DNA glycosylase 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102034274 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102034274 (NEIL1)
Enzymes [BR:
gfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
102034274 (NEIL1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102034274 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
H2TH
Motif
Other DBs
NCBI-GeneID:
102034274
NCBI-ProteinID:
XP_005419761
LinkDB
All DBs
Position
Un
AA seq
429 aa
AA seq
DB search
CFVDPRRFGSWRLGDAWQPERGPCVVSEYQAFRENVLKNLEDRAFDKPICEVLLNQKYFN
GIGNYLRAEILYRLKIPPFEKARTVLEALKEQEQERRKKDPSLTLSKKVKLKQENPDLLE
LCHSVPMEVIMAEKQLLDPEHPDDHAAFKDWLRCYLVPGMSSLRDRSGRTIWFQGEPGPM
APKGQRPRKVPRKKSPQLQAEPEAPSPKVTPRAPKQRRRAAAKPPELEEQEVKEEQEEKE
VKEKQEEQAERPRKGRAGGRRTGSAAPVSPEVPQSVRRSRRTSARRGTGEPGSACGFVHP
WGLWESSLVARGQKGRKGAHGAELDTPLPSDSSFPSLFSSCSPCRVSVTCCHLPRGILGA
KRSSGSAWPRTRVSAGENGAAPYLCSRLFAAVASCQCGREKLSLVMGLFPAVHRHFRGKR
ARSTCCIGL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
tgcttcgtcgacccccggcgcttcgggtcctggcgcctgggggacgcctggcagccggag
cgcgggccctgcgtggtgtccgagtaccaggcgttcagggagaatgtgctgaagaacctg
gaggacagggcttttgacaagcccatctgtgaggttctcttaaaccagaagtatttcaat
ggaattgggaattacctgcgtgctgagatcctgtacaggttgaagatccctccctttgaa
aaagctcggaccgtgctggaggccctgaaggagcaggagcaggagaggaggaagaaggat
ccttccctgacgctgagcaagaaggtgaagctgaagcaggagaacccagatctgctggag
ctgtgccacagcgtgcccatggaggtgatcatggcagagaagcagctcctggaccccgag
caccccgatgatcacgccgcctttaaggactggctgcgctgttacttggtgcctggcatg
agctccctgcgggaccgcagtggcaggaccatatggttccagggagagcctggccccatg
gctcccaaagggcagagaccccgcaaggtgccccgcaagaagagccctcagctgcaggca
gagcccgaggcaccgagccccaaggtcaccccccgtgccccgaagcagcgccgcagggct
gcagcgaaacccccggagctggaggagcaggaagtgaaggaagagcaggaagagaaggaa
gtgaaggaaaagcaggaagagcaggctgagaggccaaggaagggacgtgctggtgggagg
aggacagggagtgctgccccagtgtctcctgaggtgcctcagagcgtcaggagaagccgc
cgcacatcggctcgcaggggcacaggtgagcctggcagtgcctgtggctttgtgcacccc
tgggggctctgggagagctccctggtggcaaggggacagaagggaaggaaaggagcccat
ggggcagagctggatacccccttgccctctgactcctcatttccctctttgttctccagc
tgcagcccctgccgtgtgagtgtcacctgctgccacctcccgaggggcattttaggggcc
aagaggagctcaggcagcgcctggccacggaccagggttagtgctggtgaaaatggagct
gctccctacctgtgctcacgcttatttgctgctgtggcatcctgccagtgtgggagggag
aagctgagcctggtgatggggctttttcctgctgtccacaggcatttcaggggaaaaagg
gccaggtccacgtgttgtattggactctga
DBGET
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