Geospiza fortis (medium ground-finch): 102034309
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Entry
102034309 CDS
T03755
Name
(RefSeq) chromosome unknown open reading frame, human C2orf71
KO
K24165
photoreceptor cilium actin regulator
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102034309
04812 Cytoskeleton proteins [BR:
gfr04812
]
102034309
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102034309
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
102034309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
102034309
NCBI-ProteinID:
XP_005429545
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All DBs
Position
Un
AA seq
1260 aa
AA seq
DB search
MGCTPSRSETDSTAARIGLKALNKTKSVLPIDSRDKGIPLLVKGSSCYTIDEYGIQRKDY
LEEEEEDRLSELDKNDNVHLSSKAHSDSQISREDKKTERTATDAEVVMSELIESQKHITE
SIEIRKQTSCESEASAFIWDDRNESNAKQIPKKGKKKKTHKLAKQGQPNKSKEKSIVAPC
EAEKKVDFPELLVKAHQSAYAYLHPNLSKYETILHMANQATQTQLFLQQMISFLVLRFDE
INQLLEEIANDGENLLKDVGGNLAWPAEKDDLKEHPDLLQQLLQYTVNKMQLVSGMLASL
TSNALQETCSFLQSAASNLEGKLKAKQSFDEHLLRTVKLLEASTVGSSQSHGDDRTLCSE
DSGIGVDSESLKEFSALSQHGAQPGDSCAHGHPSRKHAGTAERVSMGTAASHGCALGRHS
KDVFHSSVQSREVTSCQGGVIEGTSTMPHYASLSKSRSHNSLQSDSTQEGERFKTCESTD
FPSDEDEDDDDDDEEESTLGEDDDATSLSEMGKDALSRSLSSPALTDNIQRQSIKRTENA
DTEEIILKMKDAISEKIKFVPAKSRRKEWIEDESGRAVLAKRPSTATGRQRRFGKQRRSR
SEESLRSQAEDPTLLELQRTQKELSKRLEMLYGKDRANNLESWKSRAAPYLQDDQVTSRS
SRKLKAGLSKNFSILPNQDKIATVPTQETSGGEENEPPGAQTLSASSCTPRQSVKKLIET
FSPTDDLAKAKPLRSLGPIKCIRKFGLPVIPPTAPFQRGLAPLNLKHRISPVEDTNTSDV
SSSFPNAFLPAPPAELSKKDTKEETDEDTENLPPPPPEMLMDTSENLSEPEETARIEGSS
SEDAKKTTKPELHAAKRSQVSPKMKASLQSIDLLPSKTISGPSGVTNKGLRSTRSGEEKP
HRYSLELNPTNVRIPSQEEILETQRKEAADLYKQTHKIIPLQNPSGVSTPLSSSSESKEP
NPPAPSGLRQKHGSPDPLRSGDKGSLFTRRVSPARTAPSSPTEKRLFSPPAHHRHSLQAF
SSTQPSSPSMQRKPSPPSSPRVPSPPLQKKLPSPPAQRKPLSPPVGHRQSSPTAQRLAGS
PTPFLSTPSPPASPSRSYKGPRAGLDAGDEHQLSSSKRGSNVRSIFCPATSSLFEARPPV
APSKCPAEVGSQPEAAAHPQRSSLLLQQPGDRTRRLSLSTSHPQPFVRRSFSDRRPGAQP
HLPAPLTAGSEPALHQASLEKSPRKAGDPWNSSGVPESRESSRSASHPELYVVGQGLQRD
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccttctcgcagtgagactgatagcactgctgcaagaattggtcttaag
gctttgaataaaaccaaaagtgttttgccaattgattcaagagataaaggaatccctctg
ctggttaaaggttcatcttgctacactattgatgagtatgggattcagaggaaggactac
ctggaagaagaggaggaggatagactgtcagagctggacaaaaatgataatgtgcactta
tcttccaaggctcattcagattcccagatttccagggaagacaagaaaactgagaggaca
gccacagatgctgaagtcgttatgtctgagctgattgagtctcaaaagcacatcactgag
tccatagagatcagaaagcaaacctcctgcgaatcagaagcatcggctttcatctgggat
gacaggaatgaaagcaacgcaaagcaaatcccaaagaaaggaaagaagaaaaaaacccat
aagctggcaaagcaaggtcaacccaacaaaagtaaagaaaagtccattgtggccccatgt
gaggcagagaagaaggtggacttcccagagctgctcgtcaaggctcaccagagtgcgtac
gcctacttacaccccaacctgtccaagtatgaaactattctgcacatggccaaccaggcc
acccaaactcagctcttcctgcagcagatgatcagcttcctcgtgcttcgctttgatgaa
atcaaccagctcttggaagaaattgccaacgatggggaaaatcttctcaaggatgtaggt
gggaatctggcatggccagcggaaaaggacgatttgaaggagcaccctgatcttctgcaa
cagctactgcagtacacggtgaacaaaatgcagctggtgagtgggatgctggcctccctc
acgtccaacgccctgcaggagacatgcagcttcctgcagtctgctgcaagcaacttggaa
ggcaaactgaaagcaaagcagagctttgatgagcacctgctacggacagtaaagctgctc
gaagcctcaactgtgggatcctctcagtcccacggtgatgacaggactctctgttctgag
gacagtggcattggtgtggacagtgaatccctcaaagagttcagtgccctcagccagcat
ggagcacagccaggtgactcctgtgcacacggacatccatcccgaaagcatgccgggacc
gcagagcgtgtgagcatgggcacagctgcatcccatggctgtgctcttggaaggcattct
aaagatgtgtttcattcatctgtgcaaagcagggaagtgacttcttgtcagggtggcgta
atagaaggcacttctaccatgccccactatgcaagcttgagcaaaagccgttcccacaac
tccttgcagtctgattctactcaggagggtgaacgtttcaaaacctgtgaatcaacagat
tttccttcggatgaggatgaggatgatgacgatgatgatgaagaagagagcacactgggg
gaggatgatgacgccacaagtttatcagaaatggggaaggatgctctgtcgcggtccctg
tcttcacctgcgctcactgataacattcaaaggcagtccatcaaaaggacagagaatgca
gatacagaagaaatcattttgaagatgaaagatgccatcagtgaaaaaatcaagttcgtc
ccagctaaatccaggcgtaaggagtggatagaggatgagagtggaagagcagtcctagca
aagaggcccagtacagcaacaggcagacagagaaggtttgggaaacagcgacggtccagg
tcagaggagtccctcagaagccaggcagaggacccgactctcctagagcttcagaggact
caaaaagagctcagcaaaaggctggaaatgttgtatggaaaggatagagctaacaacctg
gagtcgtggaagtcaagagcagcaccttatttgcaggatgatcaagttacatctagatcc
tcccgcaagctgaaggcaggcctctcaaaaaatttcagcatcctgcctaaccaggataaa
atagctactgtgcctacccaggagacatcaggaggcgaagaaaatgagcctcctggagca
caaacgttgagtgccagcagctgtaccccccggcagtctgtcaaaaaactgattgaaacc
ttcagtcctactgatgatcttgcaaaagccaaacctctaagatccttaggaccaataaag
tgcatcagaaaatttggacttccagtcatcccacccactgctccctttcagagaggcctg
gcacctttaaatcttaagcatcgtatttcaccagtagaagacacaaacaccagtgatgtt
tcttctagctttccaaatgcctttcttcctgcaccacctgcagaattaagcaagaaggac
acaaaggaagagactgatgaagacactgagaacctgccaccaccaccacctgaaatgtta
atggatacttctgaaaatttatctgagccggaagaaactgcaagaatagaaggaagctct
tcggaagatgccaaaaagaccaccaaaccagaattgcatgctgctaagagatcacaagtt
tccccaaaaatgaaagcttcccttcagtccatcgacttactgccaagcaaaactatcagt
ggccccagtggggtgactaataaaggtctaaggagcaccaggtcaggggaagagaaacca
cacaggtactccctggagctgaaccctaccaacgtgcgcatccccagccaggaggagatt
ttggaaacccagaggaaagaggctgcggatttatacaagcaaacccataaaattattcct
cttcagaaccccagtggggtttcaaccccactcagcagcagctcagagagcaaggagccc
aacccacctgcgccttcggggctgcgccagaagcacggctctcctgacccgctccggagc
ggcgacaagggctctctgttcaccaggagggtctcccctgcgagaactgctccttcttcc
ccgactgagaaaaggcttttcagccccccagcgcatcacagacactctctgcaggctttc
agcagcactcagccgagctcacccagcatgcagaggaaacccagtcccccctccagcccc
agggtgcccagcccacctctgcagaagaagctgccctctccaccagcacagagaaaacca
ctcagccctcctgtggggcacaggcagagctcacccacagcacagcggctggcaggctcc
cccactccattcctcagcaccccctccccaccagcctccccatctcgctcctacaagggg
cccagggctgggctggatgctggggacgagcaccagctctcctcctccaagaggggcagc
aatgtccgttccatattttgcccagccacctcttccttattcgaagccagacctccagtg
gcacccagcaagtgccctgctgaggtgggcagccagcctgaagctgcagcacacccccag
aggagcagcctgctgctccagcagcccggtgaccgcaccaggaggctgtccctgagcacc
agccaccctcagccgtttgtgaggagaagcttctccgaccgccgcccaggggcccagcct
cacctcccagctcctctgacagctggcagtgagcctgcacttcaccaagcaagcttggag
aagagccctagaaaagcaggtgacccgtggaacagctctggggttcccgagagcagagag
tccagcagatctgcttcccaccccgagctctacgtcgtgggccaggggctgcagagggac
tga
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