Geospiza fortis (medium ground-finch): 102034340
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Entry
102034340 CDS
T03755
Symbol
JARID2
Name
(RefSeq) jumonji and AT-rich interaction domain containing 2
KO
K11478
protein Jumonji
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102034340 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102034340 (JARID2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102034340 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
102034340 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
102034340
NCBI-ProteinID:
XP_005421032
LinkDB
All DBs
Position
Un
AA seq
1235 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHSDGISGSLKAVN
GLLTNGQSKGLGPGSEQLENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPIKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPSNMVYFGSSQ
DDEDEEDEEEETEDTKTATNNASSSCQSTPRKGKTHKHVPNGQVFNGSSKSSKEKEPAQK
HKSKEATPGKERNSEHKAESRKDQAAANHHATTNTGSSTKGLTANNHHTLHRSAQDLRKQ
VSKVNGVTRMSSPSANAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKKELVKETKL
NHHKPSSPVNHTISGKIESSNAKTRKQVLSLGASKSNNTAVNGVKVNGKLNQKTCTKEVG
RQLREGLRNSKRRLEETNHMDKIQSPTKRMKGAVNLAEAASKKAAVEKPLLNGHLRKEVP
EKSLERNRPKRATAGKSTPGKQAHGKTENASCENRSTSQAESLHKPQDSMGKHEKGSSKS
GWGMLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVT
QIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGXCELDLACFVQLINEMGGMQ
QVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEVLLEKEI
LEKRKGPLEGHSENAYKFHSLPRFEPKNGLINGVVHKNGFRNKLKEVDVPLKTGRRRLFA
QEKETTKEDEEEEEEGVLSDLHKCIYKGRSVSLTTFYRTARNIMNMCFTKEPTVAEVEQE
YWRIVEQKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAV
PGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWXVFLSAEENKLDVVVHTLLQ
ANGTPGLEMLESNVMISPEVLCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSESV
HFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELR
DTELRQRRQLYEAGLHSSARYGSHDSSSASVDGKKKPRKWLQLETSERRCQICQHLCYLS
MVVQENENVVFCLECALRHVEKQKSCRGLKMMYRYDEEQIISLVNQICGKVSGKNGSIEN
CISKPTPKRGPRKRATVDVPSSRLSSSSSSKSASS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagacccaagaggaatataattcaaaagaaatacgatgacagtgatggg
attccctggtcagaggagagggtggtgcggaaggtcctttatttatcactgaaggagttc
aagaatgcacagaagcggcagcacagcgatggcattagcgggagcctcaaggcagtgaac
ggacttctcactaatggccaatctaaaggattaggaccaggatcagaacagctggagaat
gagaaggacgatgcgtcgcaagtgtcctcaacaagcaacgatgttagttcttcagatttt
gaagaagggccctcaaggaaaaggccaaggctgcaagcacaaaggaagtttgctcagtcc
cagccaaacagtcccagcacaactccaataaagatagtggagccgttgttaccccctcct
gccactcagatttctgacctctccaaaaggaagcccaagacagaagattttctcactttc
ctctgtcttcgaggttctccagccctgcccagcaacatggtatattttggaagctctcag
gatgatgaggatgaagaagacgaggaggaggagacagaggacacaaaaacagccacaaac
aatgcttcatcatcatgccagtcaacccctaggaaaggaaaaacgcataaacatgtacca
aatgggcaagttttcaatgggtccagcaaatcatcgaaggagaaagaacctgctcagaaa
cacaaaagcaaagaggccaccccagggaaggagaggaacagcgaacataaggctgagagt
cgaaaagaccaggctgctgctaatcaccacgctactacaaacactggctcctctacgaaa
gggctcacggctaacaaccaccatactcttcacagatcggctcaggacttaaggaaacag
gtttctaaagtcaacggggtcactcgaatgtcatctccgagtgcaaatgcagccagtgcc
aaaaagatgagagaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacagtg
acaaagggaactgtcacatacaccaaagccaagaaagaactggtcaaggaaaccaaacta
aatcaccacaaacccagttcacctgtcaaccacacaatctcagggaaaatagaaagtagc
aatgcaaaaacccgcaaacaggtgctatcccttggagcatccaagtctaacaataccgct
gttaatggtgtaaaagtcaatggcaagttgaaccaaaagacatgcactaaggaggtgggg
agacagttaagggaggggctgcgcaactcgaagaggaggctggaagagacgaatcacatg
gacaaaatacagtcgcccaccaagagaatgaaaggggctgtcaacttggcagaagctgcc
agcaaaaaggcagcagtagaaaagcctttgctcaatggacaccttagaaaggaagtgcca
gagaagagtttggaaagaaataggccgaaaagagccactgctggaaagagtacgccaggg
aaacaagcacatggcaaaactgaaaatgcctcctgtgaaaatcgttctacctctcaagcg
gagtccttgcacaagccacaagactcaatgggaaagcacgaaaagggcagtagtaagtct
gggtgggggatgctgggggagattcccatccttaggccctccaccaaggaatttcatgac
ccactgatatacattgagtcagtccgagctcaggtagagaagtatgggatgtgcagggtg
attcctcctccagactggagacctgagtgcaagctaaacgatgaaatgcggtttgtgaca
cagattcagcacatacacaagctaggcaggcgctggggacccaacgtgcagcggctggcc
tgtatcaagaagcacctcaaatctcagggcattaccatggatgaactcccactcataggn
nnntgcgagctcgacctggcctgcttcgtccagctgatcaacgagatgggggggatgcag
caagtgactgacctcaagaaatggaacaagctggcagacatgctgcgcatccccaaaact
gcacaggacaggctggccaagctacaagaagcctactgccagtacttgctctcctatgac
tccctctcccctgaggagcacaagaaactggagaaggaggtcttgctggaaaaggaaatc
ctggagaagaggaaaggacctttggagggacattcagagaatgcctacaagttccattcc
ttgccccggtttgagcccaaaaatggactcatcaatggcgtggttcacaaaaatggcttc
cgcaacaagttaaaagaggtcgatgtcccgctgaagacgggcaggcggcggctctttgct
caggaaaaggagaccacgaaggaggacgaggaggaggaggaggagggagttcttagcgac
ttacacaagtgtatatacaagggtaggtctgtttctttaacaaccttctaccgaacagca
agaaacatcatgaacatgtgcttcacaaaggagcctacagtagctgaagtagagcaagaa
tactggcggatagtggaacagaaggattgccatgtagcagtgcattgtggaaaagtagat
accaacacccacgggagtggttttcctgtgggaaaatctgaaccattttcaaggcatggg
tggaacctcacagtccttcctaataatacaggatccatcctgcgacatcttggtgctgtg
cctggagtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtct
cgagaccaaaatcaccttccatacattgactacttacacactggtgctgattgcatttgg
taggtattcctgtctgcggaggagaacaaacttgatgttgtggtacataccctgctgcaa
gccaatggcactccagggctggaaatgcttgaaagtaatgtaatgatctccccagaggtc
ttgtgtaaggaggggatcagggtgcaccgtactgtacagcagagcgggcagtttgtggtc
tgttttcctggatcctttgtgtccaaagtatgttgtggctatagtgtttccgaatcggtg
cactttgctaccacccagtggacaagtatgggctttaaaacagccaaggaaatgaagcgg
cgccgtatagccaaaccattttcaatggaaaagttgctttatcagattgcaacagcagaa
gcaaaaaaagaaaatggaccgactctgagtacaatatcatcgctcctgggagagctcagg
gacacggagctgaggcagcggcggcagctgtacgaggccggtctccactcctcagcgcgc
tacggcagccacgacagcagcagcgccagcgtggatggcaagaaaaagcctcgaaagtgg
ctgcagttagaaacgtcagagaggaggtgtcagatttgtcagcacctgtgctatctttcc
atggttgtacaggagaatgaaaatgttgtcttctgcttggagtgtgccctgcggcatgtg
gagaagcaaaagtcgtgccgggggctgaagatgatgtaccgctacgatgaggaacaaata
atcagtcttgtcaatcaaatctgtggaaaagtatctggtaaaaatggcagcattgagaac
tgtatcagcaagcctacaccaaaaagaggacctcgtaagagagcgacagtggacgtgcca
tcatctaggctttcatcctccagttcatccaaaagtgcttcaagttaa
DBGET
integrated database retrieval system
