Geospiza fortis (medium ground-finch): 102034376
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Entry
102034376 CDS
T03755
Symbol
PDLIM3
Name
(RefSeq) PDZ and LIM domain 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102034376 (PDLIM3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102034376 (PDLIM3)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102034376 (PDLIM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102034376
NCBI-ProteinID:
XP_005415581
UniProt:
A0A6I9HBB9
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All DBs
Position
Un
AA seq
363 aa
AA seq
DB search
MPQNVVLQGPSPWGFRLSGGIDFNQPLIITRITPGSKASAANLCPGDVIIAIDGLGTENM
THNDAQERIKAATHQLSLKIERAGTKLWSPQVSEDGKAHPFKINLEAEPQDINYFEHKHN
IRPKPFIISGRSSGCSTPSGLDCGSGRSTPSSISTVSSICPMELKAVSKMAPNVPLEMEL
PGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTALGETPIISDPSPNSVCQSDVYKMLHAN
QEEPSQPRQSGSFKVLQNLVSEEDGRPVGTRSVKAPVTKIPTAMPGVQKVPQCDKCGSGI
LGTVVKARDKYRHPECFVCSDCDLNLKQKGYFFVEGQLYCEAHARARMRPPEGYETVTVY
PKC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaatgttgttctccaaggaccgtcaccctggggattcaggctctcaggagga
atagattttaaccaacctttaatcataaccaggattacacctggaagcaaggcttcagcc
gccaacctgtgccctggtgatgttattatagctattgatggtctaggcacagagaacatg
acacacaatgatgcccaggagagaatcaaagcagctacacatcagctttctttgaaaata
gagagggcaggaactaaattatggtccccacaagtttcagaagatggcaaagcacatccc
ttcaagataaatttggaagctgaacctcaggatatcaactactttgaacacaagcataat
attcggcccaaacctttcataatctcaggccgaagcagtggatgcagcactccctcgggg
ctggactgtggcagtgggcgcagcaccccctcttccattagcacggtcagctccatctgc
cccatggagctcaaagcggtgtctaagatggcccccaatgtgcccctggaaatggagctt
cccggtgtcaagattgtacacgcccagtttaacacacctatgcagttgtactcagatgac
aatatcatggaaacactgcaaggccaagtttctacagctctgggggaaacacccatcata
agtgacccatctcccaactcagtgtgtcagtctgatgtgtacaagatgctgcacgccaac
caggaggagcccagtcagccacgccagtctggctcctttaaggtgctccagaatttagtc
tccgaggaagatgggcgccctgtgggaacaagaagtgtgaaagcacctgtaacaaagata
cctactgccatgcctggtgtccagaaagtgccacagtgtgacaaatgtgggagtgggatt
ctagggacagtggtgaaggcacgtgataaataccggcatccggagtgctttgtgtgctct
gactgcgatctcaacctgaaacaaaaaggctacttctttgtggagggccagctgtactgt
gaagctcacgcccgcgcccgcatgaggccaccagagggatatgaaacagtcacggtttac
cccaaatgctag
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