Geospiza fortis (medium ground-finch): 102034442
Help
Entry
102034442 CDS
T03755
Symbol
FXR1
Name
(RefSeq) FMR1 autosomal homolog 1
KO
K15516
fragile X mental retardation protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102034442 (FXR1)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102034442 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
102034442 (FXR1)
mRNA cycle factors
Stress granule specific factors
102034442 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
102034442
NCBI-ProteinID:
XP_005419066
UniProt:
A0A6I9HEL3
LinkDB
All DBs
Position
Un
AA seq
592 aa
AA seq
DB search
MMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKTVKKNTFFKCTVDVPEDLRDACANEN
AHKDFKKAVGACRIFYHAETAQLIILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA
TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTTIELEEDTGTFRIY
GETADAVKKARSYLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK
LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRLERLQIDEQLRQIGMGFRPS
STRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERK
DELSDWSLAGEDDRESRHQRDNRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNP
YSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLDD
SDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSRQRNPPKETVAKTKKETAKDA
IDENSPSEKAVNGPATTSGDEPSKLQHSPDEKKVTVQEDGNNQEEAVLNGVS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaggagagttttatgtcattgaatacgctgcttgtgatgccacttacaatgaa
attgtcacttacgagcgactgcgacctgtgaatcagaacaaaactgtcaaaaagaacacc
ttcttcaagtgcaccgtggatgttcctgaagacctgagagatgcgtgtgctaatgaaaat
gcacataaagatttcaagaaagctgttggagcatgtcgaattttttatcatgctgaaact
gctcaactaataatactgtctgccagtgaagcaacagtgaagagagtgaacatcctcagt
gacatgcacctgcgcagcattcgcaccaagctcatgctgatgtcgagaaatgaggaagct
acaaaacacttggagtgcacaaagcagcttgctgcagcatttcatgaggagtttgtagtc
agagaagatttaatgggacttgctataggaacgcatggcagtaacatacaacaagccaga
aaggttccaggagttacaaccattgagcttgaggaggataccggtactttcagaatctat
ggagagactgctgatgcagtaaaaaaggccagaagttacttggaatttgtggaggatttt
attcaagttcccagaaatcttgttggaaaagttattggaaaaaatggaaaagtgattcag
gagatcgtagacaagtctggagtcgtcagggtgagaattgaaggagacaatgaaaataag
ctgccccgtgaagatggaatggtaccatttgtatttgttggtactaaagaaagcattggg
aatgtccaagttctgttggaatatcacatcgcatatctaaaggaggtagaacaactaaga
ctggaaaggctccagatcgatgagcagctgcggcagatcgggatgggcttcaggccctcc
tctactcgagttcctgagaaggagaagggttacaccactgacgagagcaccctctcctct
gtgcaaggctccaggtcctacagcggccggggccggggccgcaggggccccaattacacc
tctggctacggtacaaactctgagctctctaatccctccgaaacagaatctgagagaaaa
gatgaacttagtgactggtccttggcaggagaagatgacagggagagcaggcaccaacgt
gacaaccggcgacgtcctgggggacgaggacgtagcgtgtctggaggtcgtgggcgtggg
ggacctcgtggtggaaagtcatccattagctctgtgcttaaagacccggacagcaacccg
tacagcctgctggataacacggagtcagaccagaccgtggacacggacgccagcgagtcc
caccacagcagcaaccgccgcaggaggtcccgccggcgaaggactgatgaagatgctgtt
cttatggatgggatgacagagtctgatacagcttctgttaatgagaatggtttagatgat
agtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgcttcaggggtcaggca
gaagatagacagccagtaacagtagctgattatatatcacgagctgaatctcaaagtaga
cagagaaaccctccaaaggagacagtagccaaaaccaagaaagaaacggcaaaagatgcg
attgatgagaacagcccttctgaaaaggcagtgaatggtcctgccaccacctctggggat
gagccttctaaactacagcacagccctgatgaaaagaaagtcactgttcaggaggatgga
aataatcaggaagaagcagtgctgaatggtgtttcataa
DBGET
integrated database retrieval system