Geospiza fortis (medium ground-finch): 102034631
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Entry
102034631 CDS
T03755
Symbol
FDFT1
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00100
Steroid biosynthesis
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102034631 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gfr01006
]
102034631 (FDFT1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102034631 (FDFT1)
Prenyltransferases [BR:
gfr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102034631 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
DUF4073
Motif
Other DBs
NCBI-GeneID:
102034631
NCBI-ProteinID:
XP_014164101
UniProt:
A0A6I9Z8D8
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MSIPLDVKVPMLHEFHSHLYQPDWKYTESKEKDRQVLEDFPTISMEFRKLSKVYQDVISD
ICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLVGIGLSRLFSASELEDSIVGQDTDLAN
SMGLFLQKTNIIRDYLEDQMEGREFWPREVWSRYAKKLSDLAKPENIDMAVQCLNELITN
ALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLSACYNNQQVFRGVVKIRKGQAVTLM
MDATNIQAVKAIMYQYVEEIYEKIPSTDPSCHKTQQAIAAIRAASLPGGPMASRHHYSPI
YLSCAMLLAALSWQYLSTLSKATEEYVQAGDN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccccttggatgtcaaggtcccgatgctgcacgagttccactcccatctctac
cagccagactggaagtacacagagagcaaggagaaggacaggcaggtgctggaagacttc
ccaacgatctccatggagttcagaaaactgtccaaggtctaccaggatgtgatttcggat
atttgtcacaagatgggtgttgggatggcagagttcttggagaaaaaagtggattctcag
catgagtgggacaagtattgtcactacgttgctgggctggtggggattggcctctcccgt
ctcttctctgcatcagagctggaagattccatcgtggggcaggacacagacctggcaaac
tccatgggcctcttcctgcagaaaaccaacatcatccgtgactacctggaggaccagatg
gagggaagggagttctggcccagagaggtttggagcagatatgccaagaagctctcagac
cttgctaagccagagaacattgacatggctgtgcagtgcctcaatgagctcatcaccaac
gccctccaccacgtccccgacgtcctcacctacctgtcccgcctcaaaaaccaaagtgtc
ttcaacttctgtgctatcccccaggtgatggccattgccacgctgtctgcctgctacaac
aaccagcaggtgttcaggggggtggtgaagatccgcaagggccaggccgtcaccctcatg
atggatgccaccaacatccaagctgtcaaagccatcatgtaccagtatgtggaagagatc
tacgagaagatcccgagcacggacccctcgtgccacaagacgcagcaggcgatcgccgcc
atccgcgccgccagcctgcccggcggccccatggcctcccggcaccactactcccccatc
tacctgtcctgcgccatgctcctggcagccctgagctggcagtacctcagcaccctctcc
aaggccaccgaggagtacgtgcaggccggggacaactga
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