Geospiza fortis (medium ground-finch): 102034636
Help
Entry
102034636 CDS
T03755
Symbol
RAI1
Name
(RefSeq) retinoic acid induced 1
KO
K19749
retinoic acid-induced protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102034636 (RAI1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102034636 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102034636
NCBI-ProteinID:
XP_005426039
LinkDB
All DBs
Position
Un
AA seq
1112 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRSYHEPAATSLPFRTHFHSPTDGTSPDTQSGNCKNLQKEKL
PENLLSDLSLQSLTALTSQVENISNTVQQLLLSKTAVPQKKGIKTPARTPEQLKGQHCSP
ESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCNQNRSPARVNSN
SKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERDCPRLLLSALSQE
ELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQMENHRPSLDSMVKGAWPSQGDSS
TLTEPLKLDKASGASTGKDFSEEVYEGPQVEFTATESKDVLKDTAPLAFNSKPSIPAATS
SAGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATGLPQGLFPSKLVS
SCKEKKNACGLDLCDGEQPAKSEPVQDFGQQVMEEEEETLTYDEATKADSERWLQDTRHC
CSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPKPPEMPAVLSSS
EVPVSAEETVSTVEKESSAPTPRLSGQSVILLGPAVGTETKVKSWFKSSLPHIQPEEENG
GGETSHLEAADAESASSVMVKQQLTPENVLGKMEPVSRGKSLRNKRVHCRLPEGDGPGST
VLSPFDELPAASSVAGTCLGDATLLVPGLVAAEEVAGPTSLEGDAVEAGERDQRSMILRS
RTKTQEVFYTKRQRGKRAADVRLKNCKAPKKLISNNHLPPAFKLPAPGSPHKEGKVGARM
KLPQAGPGVGGKMSERPLHSLKRKSTFISPIPSKKRNLVLRSNSGGVKEEKPEGPPSLFK
KMPVAKKVKAKLPPKSSGEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGL
KLEAIVQKITSPNLKKFTGLSVSPHLSFPAPNSRVRVQKCSSCQQAGATVGCCQKGCPHT
YHYACAIDTGCLLTEESFSLRCPKHKFSEEED
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattctggggacgagagcctgcaggcatggggaggccagccacaggcactgcccggt
ggtgtggccaagtatgaggacaacctgatgaagaagacagtggcattggcaggtgggcgg
tcgtaccatgagccggcggccacctcgctgcccttccggactcatttccattctcccact
gacgggaccagccccgacactcaatctgggaactgcaaaaacttgcagaaggagaagctg
cccgaaaacctgctgtcagacctgagcctgcagagcctgacagcactcacctcccaggtg
gagaacatttctaacactgtccagcagctgctgctctccaaaacagctgtgccccagaaa
aagggcatcaagaccccagcgaggacccccgagcagctcaaggggcagcactgcagtcct
gagagcagcacctactcggcagagcaggtggggacccccctgtccgacccgctgagcacc
ccccagtctgtccacgctgagacacaggacactgactatctcagtgggtcagaggaccag
ctggagaggagtttcctgtactgcaaccagaaccgcagccctgcccgcgtcaacagcaac
tccaaggcaaagcctgagtcagtgtccacctgctctgtgacctccccagatgacatgtcc
accaaatcagatgactctttccagagtatccacgccaccctgcccctggagaccttcacc
aagtatgtgagcaatgaacgggactgcccccgactgctcctcagtgccctgtcccaggag
gagctggcttctgagatcatcgtcctgcaggatgccatcagtgagaaggcagacaaagcc
tgggccaacttgcccatgctgggcaaggagaccacaaagtcccccttccagatggagaac
caccggccaagcctggactccatggtgaaaggtgcctggcccagccagggtgactccagc
acgctcactgagcccctcaagctggacaaagcttcaggggccagcacagggaaggacttt
agtgaggaggtgtacgagggtccccaggtggagttcacagccactgaaagcaaggatgtg
ctgaaggacactgccccactggccttcaactccaagcccagcatcccggcagcgacgtcc
agcgcgggagccaccggctacagctgctactcaaacaccaccgccaactcggtggcgtct
gagaatgccatggagcatttcgagtggccggaggagagcctgggtgaggcctgcctgcgg
tggaaggatctccaggccaccggcctcccccagggcttgttccccagcaaactggtgagc
tcctgcaaggagaaaaaaaacgcctgtggcttggacctgtgcgatggagagcagccagcc
aagagtgagccggtccaggactttggccagcaggtgatggaggaggaggaggagacactg
acctacgatgaagcaacaaaggcagacagcgagaggtggctgcaggacacccggcactgc
tgctcagctggggactttagtgagatccccatcatctcctcgccggatctgaaggagtca
gacctggaggcagaggagtactcctcactctgtgagctggctggctcagagcagaagtca
gtgacatacgatgcctcaccacccaagcccccggagatgccggccgtgctgtcctccagc
gaggtgcctgtgtctgctgaggagaccgtcagcacagtggagaaggagagctcagctccc
accccacgcctctctggccagtctgtcatcctgctgggccccgctgtgggcacggagacc
aaggtgaaaagctggttcaaatcctccctgccccacatccagcctgaggaggagaatggt
ggaggggagacatcccacctggaggcggccgatgctgaatccgcctcatcggtcatggtg
aagcagcaactcacacccgaaaacgtgctggggaagatggagcctgtctcacggggcaag
agcctccgcaacaagagggtccactgccggctgccggagggggatggccctggcagcacc
gtgctgagtccatttgatgagctgccagcagccagcagcgtggccggcacctgcctgggc
gatgccaccctgctggtgcccggcttggtggcggcggaggaggtggcagggccgacatcg
ctggaaggggacgcggtggaagccggggagagggaccagcggtccatgatcctgcgctcc
cgcacgaagacacaggaggttttctacaccaagcggcagaggggcaagagggcagctgat
gtccggctgaagaactgcaaggcgcccaaaaagctcatatccaacaaccacctcccacct
gccttcaagctgccagcaccgggcagcccccacaaggagggcaaggtgggtgcccggatg
aagctgccccaagcagggccaggcgtggggggcaagatgtcggagcggccgctgcattca
ctgaagaggaagtctaccttcatctcccccatccccagcaagaagaggaacctggttctg
cggagcaacagcggtggtgtgaaggaggagaagccagagggtccccccagcctcttcaag
aagatgccagtggccaagaaggtgaaagccaagctgccccccaagagctctggcgaagcc
atcccaaagccccccctgccaaaggaggcccctgatgtctgcatcaagatcacctcccgg
gcagccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggcctc
aagctggaggccatcgtccagaagatcacctcacccaacctgaagaagttcaccggtctc
tctgtctctccacatctctccttccctgctccgaactcccgggtgcgtgtacagaagtgc
tcgagctgccagcaagcaggagccaccgtgggctgctgccagaaggggtgtccccacacc
taccactacgcgtgtgccatcgacacaggctgcttgttaactgaggagagcttctctctg
agatgtcccaaacataagttcagcgaagaagaggattaa
DBGET
integrated database retrieval system