KEGG   Geospiza fortis (medium ground-finch): 102034636
Entry
102034636         CDS       T03755                                 
Symbol
RAI1
Name
(RefSeq) retinoic acid induced 1
  KO
K19749  retinoic acid-induced protein 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102034636 (RAI1)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    102034636 (RAI1)
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 102034636
NCBI-ProteinID: XP_005426039
LinkDB
Position
Un
AA seq 1112 aa
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRSYHEPAATSLPFRTHFHSPTDGTSPDTQSGNCKNLQKEKL
PENLLSDLSLQSLTALTSQVENISNTVQQLLLSKTAVPQKKGIKTPARTPEQLKGQHCSP
ESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCNQNRSPARVNSN
SKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERDCPRLLLSALSQE
ELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQMENHRPSLDSMVKGAWPSQGDSS
TLTEPLKLDKASGASTGKDFSEEVYEGPQVEFTATESKDVLKDTAPLAFNSKPSIPAATS
SAGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATGLPQGLFPSKLVS
SCKEKKNACGLDLCDGEQPAKSEPVQDFGQQVMEEEEETLTYDEATKADSERWLQDTRHC
CSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPKPPEMPAVLSSS
EVPVSAEETVSTVEKESSAPTPRLSGQSVILLGPAVGTETKVKSWFKSSLPHIQPEEENG
GGETSHLEAADAESASSVMVKQQLTPENVLGKMEPVSRGKSLRNKRVHCRLPEGDGPGST
VLSPFDELPAASSVAGTCLGDATLLVPGLVAAEEVAGPTSLEGDAVEAGERDQRSMILRS
RTKTQEVFYTKRQRGKRAADVRLKNCKAPKKLISNNHLPPAFKLPAPGSPHKEGKVGARM
KLPQAGPGVGGKMSERPLHSLKRKSTFISPIPSKKRNLVLRSNSGGVKEEKPEGPPSLFK
KMPVAKKVKAKLPPKSSGEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGL
KLEAIVQKITSPNLKKFTGLSVSPHLSFPAPNSRVRVQKCSSCQQAGATVGCCQKGCPHT
YHYACAIDTGCLLTEESFSLRCPKHKFSEEED
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattctggggacgagagcctgcaggcatggggaggccagccacaggcactgcccggt
ggtgtggccaagtatgaggacaacctgatgaagaagacagtggcattggcaggtgggcgg
tcgtaccatgagccggcggccacctcgctgcccttccggactcatttccattctcccact
gacgggaccagccccgacactcaatctgggaactgcaaaaacttgcagaaggagaagctg
cccgaaaacctgctgtcagacctgagcctgcagagcctgacagcactcacctcccaggtg
gagaacatttctaacactgtccagcagctgctgctctccaaaacagctgtgccccagaaa
aagggcatcaagaccccagcgaggacccccgagcagctcaaggggcagcactgcagtcct
gagagcagcacctactcggcagagcaggtggggacccccctgtccgacccgctgagcacc
ccccagtctgtccacgctgagacacaggacactgactatctcagtgggtcagaggaccag
ctggagaggagtttcctgtactgcaaccagaaccgcagccctgcccgcgtcaacagcaac
tccaaggcaaagcctgagtcagtgtccacctgctctgtgacctccccagatgacatgtcc
accaaatcagatgactctttccagagtatccacgccaccctgcccctggagaccttcacc
aagtatgtgagcaatgaacgggactgcccccgactgctcctcagtgccctgtcccaggag
gagctggcttctgagatcatcgtcctgcaggatgccatcagtgagaaggcagacaaagcc
tgggccaacttgcccatgctgggcaaggagaccacaaagtcccccttccagatggagaac
caccggccaagcctggactccatggtgaaaggtgcctggcccagccagggtgactccagc
acgctcactgagcccctcaagctggacaaagcttcaggggccagcacagggaaggacttt
agtgaggaggtgtacgagggtccccaggtggagttcacagccactgaaagcaaggatgtg
ctgaaggacactgccccactggccttcaactccaagcccagcatcccggcagcgacgtcc
agcgcgggagccaccggctacagctgctactcaaacaccaccgccaactcggtggcgtct
gagaatgccatggagcatttcgagtggccggaggagagcctgggtgaggcctgcctgcgg
tggaaggatctccaggccaccggcctcccccagggcttgttccccagcaaactggtgagc
tcctgcaaggagaaaaaaaacgcctgtggcttggacctgtgcgatggagagcagccagcc
aagagtgagccggtccaggactttggccagcaggtgatggaggaggaggaggagacactg
acctacgatgaagcaacaaaggcagacagcgagaggtggctgcaggacacccggcactgc
tgctcagctggggactttagtgagatccccatcatctcctcgccggatctgaaggagtca
gacctggaggcagaggagtactcctcactctgtgagctggctggctcagagcagaagtca
gtgacatacgatgcctcaccacccaagcccccggagatgccggccgtgctgtcctccagc
gaggtgcctgtgtctgctgaggagaccgtcagcacagtggagaaggagagctcagctccc
accccacgcctctctggccagtctgtcatcctgctgggccccgctgtgggcacggagacc
aaggtgaaaagctggttcaaatcctccctgccccacatccagcctgaggaggagaatggt
ggaggggagacatcccacctggaggcggccgatgctgaatccgcctcatcggtcatggtg
aagcagcaactcacacccgaaaacgtgctggggaagatggagcctgtctcacggggcaag
agcctccgcaacaagagggtccactgccggctgccggagggggatggccctggcagcacc
gtgctgagtccatttgatgagctgccagcagccagcagcgtggccggcacctgcctgggc
gatgccaccctgctggtgcccggcttggtggcggcggaggaggtggcagggccgacatcg
ctggaaggggacgcggtggaagccggggagagggaccagcggtccatgatcctgcgctcc
cgcacgaagacacaggaggttttctacaccaagcggcagaggggcaagagggcagctgat
gtccggctgaagaactgcaaggcgcccaaaaagctcatatccaacaaccacctcccacct
gccttcaagctgccagcaccgggcagcccccacaaggagggcaaggtgggtgcccggatg
aagctgccccaagcagggccaggcgtggggggcaagatgtcggagcggccgctgcattca
ctgaagaggaagtctaccttcatctcccccatccccagcaagaagaggaacctggttctg
cggagcaacagcggtggtgtgaaggaggagaagccagagggtccccccagcctcttcaag
aagatgccagtggccaagaaggtgaaagccaagctgccccccaagagctctggcgaagcc
atcccaaagccccccctgccaaaggaggcccctgatgtctgcatcaagatcacctcccgg
gcagccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggcctc
aagctggaggccatcgtccagaagatcacctcacccaacctgaagaagttcaccggtctc
tctgtctctccacatctctccttccctgctccgaactcccgggtgcgtgtacagaagtgc
tcgagctgccagcaagcaggagccaccgtgggctgctgccagaaggggtgtccccacacc
taccactacgcgtgtgccatcgacacaggctgcttgttaactgaggagagcttctctctg
agatgtcccaaacataagttcagcgaagaagaggattaa

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