Geospiza fortis (medium ground-finch): 102034666
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Entry
102034666 CDS
T03755
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeats 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102034666 (SH3TC2)
Membrane trafficking [BR:
gfr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102034666 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
TPR_2
SNAP
TPR_1
Motif
Other DBs
NCBI-GeneID:
102034666
NCBI-ProteinID:
XP_014167654
LinkDB
All DBs
Position
Un
AA seq
1339 aa
AA seq
DB search
MPVVLPAAPTVTQEKQQAGRRSRITASPAWRMLDGAQLDIPKGEECESCWPRPPELLPHG
DRLHRRGQWWDTDTAPGTQLQDMATGKAGLAERSSPAPEAGHGSPEPPVVLLALRDTLPP
ELSLSFSVESRSCGRRNAQLQEAARRRLWALESDDRSVCALFKELSARLVCTQAHEDRFL
LTFKTPEEVWKFSTYLTLGYVGTCLEQLLFAQDFWLDCALVEDTELRVTVDEEHLATIYM
DLLLQEGNFFCRAVPGVCKLEQEGEEDLQLCRNELVHVKSAGQDSRWEGMSLLTGQRGVV
PVTALEPIAHPFYQWFLRNYSVSFGLSQEISGTSSGAIVRGRCIATKDHRGAAWDELSFS
KGDPIEIIGFFIPGLPWFVGRSLSTRSIGFVPTRHVNPQACKPLGKGFVFLSEEEKSPVL
HIPCNGDEEHFATLLGDLAHTDITSVYRLAGFEPTAVFPQVPPEAALHGSKEIQVLQSWE
EINDWATSSTSELSSPGSETAPATLEDVLLEKLDDLDYPKFFINLNTGHMEDADVFDPIL
TFLNQDSFMPSFQSFYDLSFSFLHSTFYGFSDEEELVLYLETSRNWAKRTRSVWAHVRLC
FLLGKLCTKKLKLSQARVYFEEAMNVLDRGFGDLPLLAALHGSLASIYLKQNMKHKFSSL
LGKTVTLLVCLPGRSFSSENELELLTYILRESIAVGNAPLEARICFLIVKLFLQLGRTEE
VLPFLEHLQCLSTTWLSPGSCAGPLDATATLGYLYDKKCLPNIALASIRSFVPSGTKGTP
TPIWRAGFIFQSASKLLGGQQLDRSNIPAVACVYLKQALQFCCQGRAVPMQRTLCTILSR
TYLQHGLLDGAIPYAARAAALARLLGEEEAFESSLCLAWLFVLQRQPGPHNLLAMALAAQ
GRLQEAAENFLRALHKAKEAGSCRNQAVALANLGQLSLSCGAAQLAELYLLWAVRLYSEL
QGRREMDTELAQVLLWLAQAMMDRQRVEDAKLCYELALGFALKWQNLRSQLHVTERLCHF
YSRVCPELQACITYHEHWASLARQLQVRELEASARQALSQLYQALGTPQALRQSLDCTKQ
SLRIFIDLQEAVKAAEAWLQAGKLYYLLQEDELVEMYFQAAIQTALKGDNFSLAMDLYEK
AGDTFFNGSRNRARAVEFYRGGAVPLARKLKATQTELRLFNKLAELQISLQGYEKALEFA
TLAARLSLRVGDQLQELVAFHRLARAYDLLHMHEMAEDCYLKTLAMRPPVLQSSAEALYY
CKVYWHLGNLALHKLKDEQDAASYFQLALAAATELGDQELQAQLRAKLAAIPGAPGGPEG
TPGCATERPRWLSQGGHVV
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggtgctgccagctgcccccacggtgacacaggagaagcaacaggcaggaagg
aggagcaggatcacagccagccctgcatggaggatgctggatggggcccagctggacatc
cccaaaggtgaggagtgtgagtcctgctggccccgcccgcccgagctcctgccccacggg
gaccgcctgcaccgccggggacaatggtgggacacggacacggcaccggggacacagctc
caggacatggcaacaggtaaggctgggctggcagagaggagcagccccgctcccgaggca
ggacacggctccccggagcccccggtggtgctgctggctctcagggacacccttccccca
gagctctctctctccttttccgtggagagccgctcctgcgggcgccgcaatgcccagctc
caggaggctgccaggaggaggctgtgggctctggagagcgatgacagaagtgtctgtgcc
ctgttcaaggagctgtcagccaggctggtctgtacacaggcacacgaggatcgcttcctc
ctcaccttcaaaaccccagaggaagtctggaagttttccacctatctgactttagggtac
gtggggacctgcctggagcagctgctctttgcccaggacttctggctggactgtgccctg
gtggaggacacagagctcagggtcaccgtggatgaggagcacctggccaccatctacatg
gatctgctcctccaggaagggaacttcttctgcagggcagtgcctggtgtctgcaagctg
gagcaggagggagaggaggatctgcagctctgcaggaatgagctggtccatgtgaagagt
gctggacaggattccagatgggaaggaatgtccctgctgacagggcagcgaggtgtggtg
cccgtgactgctctggagccaatagctcaccccttttaccagtggttcctgaggaattat
tctgtgagctttggcctctcccaggagatcagtgggacgagctctggggccattgtcaga
ggcaggtgcatcgccaccaaggaccacagaggagcagcgtgggatgagctgagcttctcc
aaaggagaccccatagaaatcattggattcttcatccctgggctgccctggtttgtgggc
agatccctcagcaccaggagcatcggcttcgttcccacccggcacgtaaacccccaggct
tgcaaacctctgggaaagggctttgtgttcctgagtgaagaggagaagtccccagtgctg
cacatcccctgcaatggtgacgaggagcactttgccaccctcctgggggacctggcacac
actgacatcacctctgtgtacaggctggctgggtttgaacccacagccgtgttcccacaa
gtgccaccagaggctgctctccatggcagtaaagaaatccaggtgctccagtcttgggag
gagatcaatgactgggctaccagcagcacctcagagctgtccagcccaggcagtgaaaca
gcccctgccacactggaagatgttctcctggagaagctggacgacttggattatcccaaa
ttcttcatcaacctcaacactggccacatggaggatgctgatgtctttgaccccatattg
accttcctcaaccaagacagtttcatgcccagtttccaaagcttttatgatctcagcttt
tcctttctccactccactttttatggtttctctgatgaggaggaactggtcctgtacctt
gagacttcccggaactgggccaagaggactcgttcagtttgggctcacgtcaggctctgt
ttcctcttgggtaagctctgcaccaaaaagctcaagctctcccaggcccgggtgtacttt
gaggaagccatgaatgtcctggacaggggctttggggacctgcccctgctggcagcgctg
cacgggagcctcgcctccatctacctgaagcagaacatgaagcacaagttctcctccctg
ctggggaagacagtgaccctgctcgtgtgcctgcctggccgctccttcagctcggagaac
gagctggagctcctcacctatatcctgagggaatccatcgccgtgggcaatgccccgctg
gaggcccggatctgcttcctcattgtcaagctcttcctgcagctgggcaggaccgaggag
gtgctgccctttttggagcatctccagtgtctcagcaccacctggctcagcccaggcagc
tgtgctgggcccctggatgccactgccacactgggctacctctatgacaagaagtgcctg
ccgaacatcgcgctggcctccatcaggtccttcgttcccagtggcaccaagggcacaccg
acccccatctggcgagccggcttcatcttccaaagtgcttccaagctcctgggggggcag
cagctggacaggagcaacatcccagcagtggcttgcgtgtacctcaagcaggctctgcag
ttctgctgccagggcagggccgtgcccatgcagaggacactctgcaccatcctgtccagg
acgtatctccagcacggcctgctggacggagccattccctacgcagccagggctgcagct
ctggccagactgctgggggaggaggaggcgtttgagtcctcgctgtgcctggcctggctg
ttcgtgctgcagcggcagccgggcccgcacaacctgctggccatggccctcgccgcccag
ggccgcctccaggaggccgctgagaacttcctgagggccctgcacaaggccaaggaggcg
gggagctgcaggaaccaggccgtggccctggcgaacctgggccagctgagcctgtcgtgc
ggggccgcccagctggccgagctgtacctgctgtgggcagtgcggctctacagcgagctc
cagggccgcagagagatggacacggagctggcacaggtgctgctgtggctggcacaggcc
atgatggacaggcagagggtggaagatgccaaattgtgctatgagctggcgctggggttt
gctctgaagtggcagaacctgaggagtcagctgcacgtcacggagcgtctgtgccatttc
tacagcagagtgtgccccgagctgcaggcctgcatcacctaccacgagcactgggcatcc
ctggcacggcagctgcaggtcagggagctggaggccagtgccaggcaggccctcagccag
ctctaccaggctctgggcacacctcaggctctgagacaatccctggactgcaccaagcag
agcctgaggatcttcatcgacctgcaggaggctgtgaaggcagcagaagcctggctgcag
gcaggaaagctctactaccttctgcaggaggatgagctggtggaaatgtacttccaggca
gccatccagactgctctgaaaggggacaacttctccttggccatggacctttatgagaaa
gcaggtgacaccttcttcaatggcagccggaacagggcccgggcagtggagttttacagg
ggaggagctgtgcccttggccaggaaactcaaggccacccagacagagctgaggctgttc
aacaagctggcagagctgcagatcagcctgcagggctatgagaaggctctggagtttgcc
acgctggcagccaggctcagcctcagggttggggatcagctgcaggagctggttgccttc
caccgcctggccagagcctatgacttgctgcacatgcacgagatggccgaggattgctac
ctgaagaccctggccatgcgtccccccgtgctgcagagctcagcagaggctctgtactac
tgcaaggtctactggcacctgggcaacctggccctgcacaagctgaaggatgaacaggat
gcagcctcctacttccagctggccctggctgcagccaccgagctgggggaccaggagctg
caggcccagctccgtgccaagctggctgccatccctggagccccagggggacctgagggc
accccaggctgtgccacagagcggccccggtggctgagccaaggtggccacgtggtgtga
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