Geospiza fortis (medium ground-finch): 102034681
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Entry
102034681 CDS
T03755
Symbol
MYO5B
Name
(RefSeq) myosin VB
KO
K10357
myosin V
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102034681 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102034681 (MYO5B)
04131 Membrane trafficking [BR:
gfr04131
]
102034681 (MYO5B)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102034681 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102034681 (MYO5B)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102034681 (MYO5B)
mRNA cycle factors
P-body specific factors
102034681 (MYO5B)
Membrane trafficking [BR:
gfr04131
]
Others
Actin-binding proteins
Myosins
102034681 (MYO5B)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102034681 (MYO5B)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102034681 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
102034681
NCBI-ProteinID:
XP_014163773
LinkDB
All DBs
Position
Un
AA seq
1871 aa
AA seq
DB search
MKELSRAVRDPPGSELSDGERALSLRSASPGAAREGCGQPRSGNANNISHYTRVWIPDPD
EVWRSAEIIKDYKEGDKSLQLKLEDETLYEYPIDPPGSELPFLRNPDILVGQNDLTALSY
LHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYEQDVIYAYSGQNMGDMDPHI
FAVAEEAYTQMAREEKNQSIIVSGESGAGKTVSAKYAMRFFATVGGSASETNIEAKVLAS
SPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTYLLEKSRVVFQAEDERNY
HIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGDTSIDGMDDADDFEKTRHAFTLLGVKE
SHQMTIFRIIAAILHLGNLKIQGERDGEVCSVSSEDEHLSSFCSLLGVEHSQMQHWLCHR
KLVTTAETYVKSMSLHQVVNARNALAKHIYAQLFNWIVQHVNKALHTTVKQHSFIGVLDI
YGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEGIPWTLIDFYDNQPCIDL
IEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHAASQHFQKPRMSNTSFIVLHFADKVEY
QSEGFLEKNRDTVYEEQINILKASQYQMVADLFQEEKDAVPATAVAKRAPQINVRSAKPA
FKAANKEHRKTVGHQFRNSLQLLMETLNATTPHYVRCIKPNDEKLPFKFDPKRAVQQLRA
CGVLQTIRISAAGFPSRWSYPDFFNRYRVLMNKRDLSKNDKRQICQTLLEDLIKDPDQFH
FGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRARYQRLRRANLALQRYARG
HLARRLFQHLRRTRAAIILQKQYRMLRMRRAFLRVRSATLTIQAFARGMFVRRIYHQWKL
LQRRQLVHQLNSLRFKATQILTRARRQLQALRIEARSVQHLKKLNIGMENKVVQLQRKVD
EQNKENKLLNEQLSMLTSAHSSEVEKLKKELQQYQRTQQGDGKQLLSLQEETERLRMELE
RAHGEREVLEDSHGKERDLLRKRICDLEEENALLKQEKEELNSRILCQSEDEFARNTVEE
NTQMKKELEEERSRYQNLVKEYASLEQRYDNLRDEMTIFKQTLGHRRNSSNQSSLESDSN
NPSICTSEIGDTEDVIQQVEEIGMEKAAMDMTLFLKLQKRVRELELERKKLQAQLEKKEQ
ESKKSQVNEIKTESTSEYEDFAYNSLKRQELESENKKLKNELNELRKAIADHATQNNSSN
DVQDSYNLLLNQLKLANEELEVRKEEVLILRSQIMKAAQQKETGENMESISPNASWPNSD
RHIDQEDAIEAYQGMCETNRKTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQDQRREHE
EEMEALKNQVDLMQEELEKQQQAFMQTLQLSPEVQVEFGLQQEITRLTNENLDLKELLEK
LEKNEKKLKKQLKIYMKKVQDFEASQTMVPVERRPHEQNMQVAVQRKEKDFQGMLEYYKE
DEPLLIRNLITDLKPQAVSATVPCLPAYILYMCIRHADYINDDQKVHSLLTSTINGVKKV
LKKHQDDFEMTSFWLANTCRLLHCLKQYSGEEGFMTQNTAKQNEHCLKNFDLTEYRQVLG
HLSIQIYQQLINIAEGILQPMIVSAVLENESIQGLSIVKPVSYRKYSSNAGDSSYSLDEM
IRQLNTFHSIMCDQGLDPEIIQQVFKQLFYMINAITLNNLLLRKDVCSWSTGMQLRFNIS
QLEEWLHGKNLQQSGAAQTLEPLIQAAQLLQLKKKTSEDAEAICSLCTSLTTQQIVKILT
LYTPVNEFEERVTVAFIRNIQKQLQERNDPPQLLLDFKHMFPVVFPFNPSAITMDSIHLP
ASLNLDFLNKV
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagctctcgcgggcagtgcgagatccgcctggctcggagctctctgatggggag
agagccctctcgctgcgctccgcatctcccggggctgctcgggagggctgcgggcagccg
cggtccgggaatgccaacaacatcagtcactacactagggtttggattcctgaccctgat
gaagtttggagatcggcagaaattatcaaggattacaaagagggagataaaagcctccag
ctgaaacttgaagatgaaactctctatgagtatcccattgacccgccggggagtgagctg
cccttcctacgcaacccagacatcctggtggggcagaatgacctgacagcccttagctac
ctgcacgagcccgctgtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatc
tacacctactgtggtattgtgctggtggccatcaacccctatgagcagctgccaatctac
gagcaggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatc
ttcgccgtggccgaggaagcctacacgcagatggccagggaagagaagaaccagtccatc
atcgtgagtggggagtcaggggcgggcaagacggtctctgccaaatacgccatgcgcttc
ttcgccaccgtcgggggctccgccagcgagaccaacatcgaagccaaagtcctggcctcc
agccccatcatggaggccattggaaatgctaaaacaacaaggaatgacaacagcagccgc
tttgggaaatacattcagattggctttgataaaagataccacatcattggtgccaacatg
aggacgtatctgctggaaaaatctcgggttgtatttcaggcagaggacgagcgcaactac
cacatcttctaccagctctgtgcctcctcaagcctcccagaattcaaagaccttggactc
acatgtgctgaagactttttctacacttctcagggaggtgacacgtccatcgacggcatg
gacgatgctgatgactttgagaaaaccagacatgccttcacactgcttggagtgaaggag
tctcatcagatgaccatttttaggataattgctgccattctgcacctggggaacttgaag
atccaaggggaacgagacggggaggtctgcagtgtatcgagcgaggacgagcacctgagc
agcttctgcagcctgctgggtgtggagcacagccagatgcagcactggctctgccaccgc
aagctcgtcaccacggctgagacctacgtgaagagcatgtccctgcaccaggtggtgaac
gccaggaacgccctggccaagcacatctacgcccagctcttcaactggatcgtgcagcac
gtcaacaaggccctgcacaccactgtgaagcagcactccttcatcggcgtgctcgacatc
tacgggtttgaaacttttgaagtgaatagctttgagcagttctgtatcaactatgccaac
gaaaagctccagcagcagttcaactcgcacgtgtttaagctggaacaagaagagtacatg
aaggagggaatcccctggactctcatagacttctatgacaaccagccctgcatagacctg
atagaggccaagctggggatcctggacctgctggatgaggagtgcaaggtgcccaagggc
acggaccagaactgggcgcagaagctgtatgaccgccacgccgccagccagcacttccag
aagccgcgcatgtccaacacctccttcatcgtcctgcacttcgctgacaaggtggagtac
cagagcgaggggtttctggagaagaacagagacactgtgtatgaggaacagatcaacatc
ctgaaagccagccagtatcagatggtagcagacttattccaggaggagaaggatgctgtg
cccgccactgccgtggcaaagagagcaccccagatcaacgtgcgctctgccaagccagcc
ttcaaggctgccaacaaggagcacaggaaaacagtgggacaccagttccgcaactccctg
cagctgctgatggagaccctgaacgccaccaccccgcactacgtgcgctgcatcaagccc
aacgatgagaagctccccttcaagtttgatccgaagagagcagtgcagcagctgagagcc
tgcggagtgctgcagaccatccggatcagtgccgctggcttcccatccaggtggtcctac
cctgactttttcaataggtaccgagtgcttatgaacaagagagacctctctaagaacgac
aagaggcagatctgtcagaccctgttggaagacctcattaaggatccagaccagttccat
tttggccgtaccaagatctttttccgtgcaggccaggtggcatatctggagaagctgcgg
gcagataagttcagagctgccaccatcatgatccagaagacggtgcggggctggctgcag
agggccaggtaccagcggctgaggcgagccaatctcgccctgcagcgctacgcccgcggg
cacctggcacgcaggcttttccagcacctgaggaggacgagggctgccatcatcctgcag
aagcagtaccgaatgctgcggatgcgccgggccttcctgagggtccgcagcgccacactc
accatccaggcttttgctcggggcatgtttgtcaggaggatttaccaccagtggaagctt
ctgcagaggaggcagctggtccatcagttaaactctctaagattcaaggccacccaaatc
ttaacaagggcccggcgccagctccaggccctccgcatcgaggcccgctcggtacagcac
ctcaagaagctcaacatcggcatggagaacaaggtggtgcagctgcagaggaaggtggat
gagcagaacaaggagaacaagcttctgaatgagcagctgtccatgctgacatcagcccac
tcctccgaggtggagaagctgaagaaggagctgcagcagtaccagcggacccagcagggc
gatggcaagcagctcctcagcctgcaggaggagaccgagcggctgcggatggagctggag
agggctcacggggagagggaggtgctggaggacagccacggcaaggagagggacctgctg
aggaagcgtatctgcgacctggaagaagaaaacgctctcctgaagcaggaaaaagaggag
ctgaacagcaggatcctctgtcagtctgaagatgaatttgcacgaaacacagtagaggaa
aatacgcagatgaagaaagagctggaagaagagagatctcgttatcagaacctggtaaaa
gagtatgcaagtctggagcagagatatgacaatttgagggatgaaatgactatttttaag
caaacactagggcacaggagaaactcatccaaccagagcagcttggagtctgattccaac
aacccatccatctgcacctctgagatcggggacaccgaggatgtgatacagcaggtggag
gagattgggatggagaaagcagccatggacatgaccctcttcctaaagctacagaagcga
gtgagggagcttgagctggagaggaagaagctgcaagcccagctggagaaaaaggagcaa
gagagcaagaaatcccaggtaaatgaaataaagactgaatcgacttcagaatatgaagat
tttgcatacaacagccttaagaggcaagagctggagtcagagaacaagaagctgaaaaat
gagctcaatgagctgaggaaggccatcgcagaccacgccacccagaacaactcctccaac
gacgtgcaggacagctacaatctcctcctgaaccagctgaaattggccaacgaggagctg
gaggtgcgcaaggaggaggtgctcatcctcaggtcgcagatcatgaaggcagcccagcag
aaagagacgggggaaaacatggagagcatctcccccaatgccagctggcccaacagtgac
cggcacattgaccaggaggacgcaatcgaagcctaccagggcatgtgcgagaccaaccgc
aagactgaggactggggctatctcaatgaagatggagagctcggcttggcttatcaaggt
ttaaagcaagttgccaggttgctggaagcacagctccaggaccagagaagggagcatgag
gaggagatggaagctctgaaaaaccaggtggatttaatgcaagaggagctggagaagcag
cagcaggcattcatgcagactctgcagctctctccagaggtccaggtggagtttggactt
cagcaagaaattacacgtctgaccaatgaaaacctggaccttaaagaattgctggaaaag
ttggaaaagaatgaaaagaagctgaagaagcagctgaagatttacatgaagaaggtccaa
gattttgaagcatcccagacaatggtgccagtggagaggaggccgcacgagcagaacatg
caggttgctgtccagaggaaggagaaggattttcagggcatgctggaatattacaaagaa
gatgagccactcctcatccgaaacctcattacagatctcaagccccaggcagtgtctgct
actgttccctgtcttcctgcttacatcctctacatgtgcatcagacatgcagattacatc
aacgatgaccagaaggtgcactccttgctcacctccaccatcaatggcgttaagaaagtg
ctgaagaagcaccaggatgactttgagatgacatcgttctggctggcgaacacgtgccgg
ctgctgcactgcctgaagcagtacagcggggaagagggtttcatgacccaaaacacagcg
aaacagaacgagcactgcctgaagaactttgacctgaccgagtaccggcaggtgctgggc
cacctctccatccagatctaccagcagctcatcaacattgcagagggcatcctgcagccc
atgattgtgtctgctgtgttggaaaatgagagtatccaagggctttccattgtcaaaccg
gtgagctacaggaaatattcctccaatgcgggtgacagctcctacagcttggatgaaatg
attcgccagctgaacacattccacagcatcatgtgtgaccagggcctggacccagagatc
atccagcaggtgttcaagcagctcttctacatgatcaatgccatcaccctgaacaacctc
ctgctgaggaaggatgtctgctcgtggagcacgggcatgcagctgaggtttaacatcagc
cagctggaggaatggctgcatgggaagaatctgcagcagagtggagcagcacaaactttg
gagcccttgattcaggcagcacagctcctgcagctgaagaagaaaacctcagaggatgct
gaggccatctgctccttgtgcacatcgctcacaacccagcagattgtaaagatactgact
ctctacactcctgtgaatgagtttgaagaacgtgtgacagtagctttcatacgaaacata
cagaagcagttgcaagaacggaatgaccctccacagctgctgttagacttcaagcacatg
ttcccagttgtgttcccattcaacccatctgccatcaccatggactccattcatctccct
gcttctctcaacttggattttctcaataaagtctga
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integrated database retrieval system
