Geospiza fortis (medium ground-finch): 102034707
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Entry
102034707 CDS
T03755
Symbol
RNF115
Name
(RefSeq) ring finger protein 115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102034707 (RNF115)
04121 Ubiquitin system [BR:
gfr04121
]
102034707 (RNF115)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102034707 (RNF115)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102034707 (RNF115)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102034707 (RNF115)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
zf-RING_16
zf-Nse
DZR_2
C1_2
Zn_ribbon_6
DZR
DUF7560
zf-HC5HC2H
Rad50_zn_hook
IBR_1
Motif
Other DBs
NCBI-GeneID:
102034707
NCBI-ProteinID:
XP_014166518
UniProt:
A0A6I9Z9B5
LinkDB
All DBs
Position
Un
AA seq
287 aa
AA seq
DB search
MAEAAAAVQQHRFFCHSCKGEVSPKLPEYTCPRCESGFIEEVTDDSSFFDSNSLDDSPSS
QFSELWDHLDHTMFFPDFRPFLSSSSLDAEPRDVERGAPAELWGPSRPPRLPMPRRYRAR
GSSRPDRSPAIEGIIQQIFAGFFANSAVPGSQHPFSWSGMLHSSPGDYAWGQSGLDAIVT
QLLGQLENTGPPPADKEKISSLPTVPVTQEQVDTGLECPVCKEDYTVAEQVRQLPCNHVF
HSSCIVPWLELHDTCPVCRKSLKGEDSTRQIPNPDASDSPVQERWTF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcggcggtgcagcagcaccggttcttttgccacagctgcaagggc
gaggtcagccccaagctgccggaatacacctgccctcgctgtgagtctggcttcatcgag
gaagtcactgatgattccagtttttttgacagcaattccctggatgacagcccctcctct
cagttctcagagctttgggaccacctggaccacacgatgttcttcccggatttccggccc
ttcctgagcagcagctccctggatgcagagcccagggacgtggagaggggcgccccggcc
gagctttggggtcccagccgcccccctcggctgcccatgccccgcaggtaccgggcccgg
ggcagctcccgcccggatcgctcgccggccatcgaggggataatccagcagatcttcgcc
ggcttttttgccaactcagccgttcctggctcccagcatcccttctcctggagcgggatg
ctgcactccagccccggcgattacgcgtggggacagagcggcctcgacgccatcgtcacc
cagctcctggggcagctggagaacacaggaccaccaccagcagacaaggagaagatctcc
tcgctccccacggtgccggtgacgcaggaacaagtcgacacagggctggagtgccccgtg
tgcaaggaggattacaccgtggccgagcaggtccggcagctcccctgcaaccacgtcttc
cacagcagctgcatcgtgccctggctggagctgcacgacacgtgtccggtgtgcaggaag
agcctcaagggggaagattccaccaggcaaatcccaaatcccgatgcttccgacagccca
gtgcaggagagatggactttctga
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integrated database retrieval system
