Geospiza fortis (medium ground-finch): 102034787
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Entry
102034787 CDS
T03755
Symbol
UTP20
Name
(RefSeq) UTP20, small subunit processome component
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102034787 (UTP20)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102034787 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
102034787
NCBI-ProteinID:
XP_005421725
UniProt:
A0A6I9HJ25
LinkDB
All DBs
Position
Un
AA seq
2837 aa
AA seq
DB search
MRCPRVGQHKLLFPGHRCGLPRVPSCSSPPSYTTAAERGCFAHGAAEPSLGAKFLTFSER
LSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNLTRHFVQFYNEVANKCQSFNQLV
YYQSAVVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQADFYPHFHDFFLAITKLLDTQDT
ELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAHHKLHIRNFAAESFVFLMRKVSD
KNELFNLMLRDLGEHPEKVEGVGQLLFEMCKGVRNMFHSCAETAMKLILMKLGPMTEEEI
ELPWVAVGEAFKQMIKSAAVHIHKEHFDIVFKCLEESLLDLQKKITKVNCSVASEQIERI
LQAYLILVEHANGSKISLPEDVCQVLIKMLQTPYLSSSCCKMLLNAISAFLXXXXLAENV
LLPESLTKEAIQKVFASRFERHFLLDFSEAMFTMKQFERHFLPCFLEYIEHCFSGTDAIT
KDEAMAILAKLILVKAEPPTIGSMAFEKYPLVFTEASVSSNTRQQTSKRQGEKTGVPVLD
HVLSLMHLPEKEDITDLSQSWVALVVLPHIRPMNKDHILPHVTSFIDSLFTAIDKGNLCK
GSLFVACQAVSTLLSLVESAEVLHLLPVERVKNLVTTFPSDPSALLLADLYYTRLALCGC
QEPLSQRNLMDLFEKLHPNISTGVSKVRLLTVRILNHFDNPPSAQIEGDGTGEFQPVFAI
LLQAELVPATVNDYREKLLHLRKLRCDIVQPAIPSGSLQEVPLRYLLGMLYINFSPLWDP
VIELITSHAKEMENKQFWKVLYEHLERAASYAEMELQDELDEQEESIAETESEKIPEGEV
GTVFLEQLRSRTDCSERLDHTNYRFLLWKALDKFPDRVEPRSRELSPLLLRFIRNEYYPA
DSLVAPSQDLRRKISGTIAAKQIPAEEVNDVAMEEEEEEEEEEFEEGEPISIGVPKKKTR
RAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQNVQRIALDCIMTYKHPHL
LPYRENLQRLLEDKSFKEEIVHFSISEETTVVKTEHRPDLIPVLMRILYGRMRNKTGSKT
QGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQTAVLQSMSELDLAKV
LPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMTAVVSCILQQREKVQPRLINPL
KNLRRLGLKLVAEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLASESQYSPTFLLKLIHT
WSKNPRYFPLLAKQQPDHPESDILTNVFAVLSAKNLSEATSSLVMDIADSLLNSPDFEPT
EQVSSLSVTDCVVMATGDVTEEPVSLGCRLVLPHVPTILQYFSKTMLNVEKVKKKKYRAQ
VSKELSILSKISKFIQEKSQNSVLVSLLIPFLYQTNMEQGTQIDILETVQNLLRHCSNPT
SFLKPLAKLFSVIQNKLSRNKLCLVFQTLSDLDAKLKYITDVVKLNAFDQRHLDDIDFDV
RLSAFQSITAHIKEMQTVDTDFLIPVMHNCFYTIQLGDMALSDNASLCLTSFIHRLAEIS
HTEDEYKELIQHTLLESVRRGLKSKTESVQQDYTSLLSCLIQTFPTNPEFQDLVQLTNRH
DPDMDFFENMKHMQIHRRARALRKLAKQLTEEKLVLSSKSLQNYIMPYATTAIFTEKMLK
HENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQIGTKLGVSLLETVLEAFHFDH
KTLEKQLVTIDNQETAAMDLEPVVEAEEAMELEQSEGEEEEAEEKNGKNPSEKPVEPEQA
AEPSENAEQVPKPVSFLPRNKEELQCLIKHIQETVTVNILPKLHRCIVAKVKRDEEHKLV
KSNVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKVCTFLRNRFQEIRDIARNT
LIKIMEVLGVHYLLYILKEMRSALIHGYQLHVLTFTVNLLLKGLTTRLSAGDLDPCLDIL
IEIFNQELFGNVAEEKEVKGIVSKIMEARKNKSYDSYEILGKFIGRGQVTKLILPLKETL
ESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLISENLPLLTEKAKKKATPP
PDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLLHMSLKRSKVNSSEEHAL
EMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVGTNMESLIKQLFLLLKEFAK
TGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAEEDIYDSSRQATAFGLLK
AILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKYILDYPLGDKLKPNLDFML
AQLEYEYETGRESALEMIAYLLDTFPRDLLHKYCGLFFLSLCMMMINDDSAKCKKMAALT
CKSLLRKISNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVEVDGVMFERRLAAVLTL
IEKEINPSRFENITEEEEEKAADRLLFSFLVLVKKLITECNLIQLTKHSDVVSRIWDHVQ
SHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKERKSGKRKKTPAELSASTVFLTAEL
DKKMKELAFAFCHQLQSKFLDLSLSEQVIKNLLFVAKVVYLLAPASEGKEADGELRCEVE
EQEVSEDERDTSAQGEEEREDTQEKGQPATLLWLMKKLSVMGKREAAYSPKVPLKRSCIF
KFLGAISVDLGQDRIKPYLPTILTPLYRELNSNYAEQDPTLKNLSQEIIELLKKLVGLEA
FSLAFSSVQKQANQKRAMRKKRRALQTVANPDIAARRKLKRHKNKAETRKRKIESLRPMY
KAKRHRSNALKDLAMVE
NT seq
8514 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtccccgggtgggacagcacaaactgctcttccctgggcaccgctgtggcctc
ccccgggtaccgagctgctccagcccgccgtcctacaccacagcggcggagcggggctgc
tttgcccacggcgctgcggaaccctcgctcggtgccaagtttcttaccttttcggagcgc
ctaagcaacattaatattgatattattcatcgcattgacagaactgggagctatgctgag
gaggttgaaacctacttttttgaaggactgcggaaatggaaggagctgaacctcactcgc
cattttgtgcaattctataatgaagtggccaacaaatgccagtccttcaaccagctggtt
tattaccaaagtgctgttgtgcagagcttgaagacacatctgcaagtcgaaggcagtctt
gcttatcagcccctattaaatctagtggtgcagctggctcgagatcttcaggctgacttc
tatcctcactttcatgacttcttcctggccatcaccaagttattggacacacaggataca
gagctgctagaatgggcgtttacctctctttcctatctctacaagtatttgtggagattg
atggtgaaagacatacacaacatatacagcctgtacagcaccctgctggctcaccacaaa
ctccacatcagaaactttgctgctgaaagttttgtctttctaatgagaaaggtttctgat
aaaaatgaactcttcaatttaatgctccgtgacctgggagagcaccctgagaaggtggaa
ggtgtaggacagctgctttttgagatgtgcaagggtgttcgaaacatgttccactcctgt
gcagagacggctatgaagttaattctgatgaagctggggcctatgactgaagaagaaatt
gagctaccatgggtagctgttggagaagccttcaagcaaatgatcaaatcagctgcagtg
catatccataaggagcattttgacattgtcttcaagtgcctggaggagtcactcctagat
ttgcagaagaaaataacgaaggtcaactgctctgtggcttcagagcagatagaaaggatt
ctgcaagcttatctgatcttagtggaacatgcaaatggatctaaaatctcactgcctgaa
gatgtctgtcaggttttaataaaaatgttacagacaccgtatctctcatcatcttgctgc
aagatgctgctgaatgccatttctgcattcctgnnnnnnnnnnnnctggcagaaaatgtt
ttgttgccagagtctttgaccaaggaagctattcagaaggtatttgcaagtagatttgaa
cggcattttcttttggacttctctgaagcaatgttcacaatgaagcaatttgagaggcat
tttctcccatgctttctagaatacattgaacattgcttctctggcacagatgccatcaca
aaggatgaggccatggcaattctggctaaactcattttggtgaaagcagagcctcctacc
attggttcaatggcatttgaaaagtatcctcttgttttcactgaggcatctgtcagctct
aatacaaggcaacaaacaagtaaaagacaaggagaaaagacaggagtaccagtgttggat
catgtactgtccttaatgcatttaccggagaaggaggacatcactgacctttcacagtct
tgggttgccttggttgtactaccacatataagaccaatgaacaaagaccacattctgcct
catgtaacaagttttatagactctctcttcacagctattgacaaaggaaacctctgcaaa
ggaagcctgtttgtggcgtgccaagctgtaagtactctacttagtttggtggaatctgct
gaagtactccatttgttacctgtggagcgtgtcaagaacttggtgaccactttcccttca
gacccctctgctttgctgttggctgatctctattacacgaggctggcattatgtggctgc
caggagcccctttcccaaaggaacctaatggacttgtttgagaagttgcatcctaatatt
tccaccggtgtttccaaggtccggctgttgacagttcgaattctaaaccattttgataat
ccaccttctgcacagattgagggtgatggcacaggggaattccagccagtatttgccata
ttgctccaagcagaacttgtgccagcaacagtgaatgattacagagaaaaacttctccat
ttgaggaaactaagatgtgacatagtgcagcctgcaataccaagtggatctttgcaggag
gtgcctcttcggtatttactaggaatgctttatattaacttcagccctctctgggatcct
gttattgagcttataacttctcatgcaaaggaaatggagaataaacagttctggaaggtc
ctgtatgaacatttggagagggctgctagctatgctgaaatggagctacaagatgaatta
gatgaacaggaggagagcattgctgaaacagaaagtgagaagataccagaaggagaggtg
gggactgtctttctggagcagctgaggagtagaacagattgcagtgagcggctggaccac
acaaattacaggttcctactttggaaagcactggataagtttccagatagagtggagcct
cggtcgagggaactttccccacttcttttgagattcattcgaaatgagtactacccagca
gattccttagtggctccctctcaggatctcagaaggaaaattagtggtaccatagcagca
aaacaaatacctgctgaagaggtgaatgatgttgctatggaggaggaggaggaggaggag
gaagaagaattcgaagaaggggaaccaattagtataggagtaccgaaaaagaaaacaaga
agagctgctgctaagcaactaatagcccacttacaagttttctcaaaattctcaaatcct
cgcgcattgtatctggagcagaagttgaatgccttgtatacccagctactctctcatcaa
gaccagaatgtacagagaatagctcttgactgtataatgacatacaagcatcctcatcta
ctgccatacagggagaacttgcaaaggctactggaggacaagagctttaaagaagagata
gtccatttcagtatttctgaggagaccacagtagtaaaaacagagcatcgaccagatctc
atccctgttctaatgagaattctctatggcagaatgagaaacaaaacagggagcaaaaca
cagggcaagtcttcagcgagcactcgcatgtcgattgttctgcgatttctggccggctcg
ctgccagaagagatccggatgttcttggatctactctttgaagctgtgaagcaattcagt
aatgggccttgccagactgcagtccttcaaagtatgtcagagctggatttagctaaagtc
ctgcctcttgggcgtcagcatagcctcttcaatggtcttgaggttgtgttgaaaaacatg
ggacatttgatccagcaatacctgcctgaaattctgcagattctgctctgcatgactgca
gtggtatcctgcatcctccagcaaagagagaaggtccaacctaggttgattaatccactg
aagaatttgagacgtcttggtctcaagcttgtggcagagtttttttctgattatgagacc
tacagctttagtgtggaagagattgatgcagttttccatgctgtggtatggcctcaggtc
tgcagattggcttcagagagtcagtattctccaacttttctgctcaagctcattcacacc
tggagtaagaaccccaggtatttccctttgttggccaagcagcagccagatcatccagag
agtgatatactgacaaatgtttttgctgtgctgtcagccaagaatctgtctgaggccaca
tccagccttgtgatggacattgctgatagccttctcaacagcccagattttgaacccacg
gagcaggtttccagtttgagcgtgactgactgtgttgtcatggccactggagacgtgaca
gaagagccagtcagcctaggttgccggttggtcctgcctcatgttcctaccatacttcag
tacttcagcaaaacaatgttaaatgtggagaaggtgaaaaagaagaagtacagagctcaa
gtgagcaaagagctgagtatactttccaagatcagcaaattcatacaagaaaagagccag
aattcagtacttgtgagccttctcatccctttcctttatcagactaacatggagcagggt
acacaaattgacattctggagacagtgcagaacttgctgaggcattgctcaaaccctaca
agctttctcaaaccactggcaaagcttttttctgtcatccagaacaaactgtctcgaaat
aagttgtgcttggtatttcagactttatctgacttggacgctaagttgaagtatattact
gatgttgttaagctgaatgcctttgatcagcgacatctggatgatatcgacttcgatgtg
cgtctgtcagcatttcagtcaatcacagcccacatcaaggaaatgcaaacagtggatact
gacttcctcatccctgttatgcacaactgcttctataccatccagctcggtgatatggct
ctcagtgacaacgcaagcctttgcttgaccagtttcatccaccgactggcagagatcagc
cacacagaagatgagtacaaggagctaatccagcacactctcctggagtctgtgagaagg
ggtctgaagagtaagactgagagcgtccagcaggactacacatcactgctttcctgcctc
attcagacattcccaacaaatcccgaattccaggatttggtccagctgaccaaccgtcat
gatcctgacatggacttctttgagaacatgaaacacatgcagatccacagaagggcacga
gctctgaggaaactggcaaagcagctcactgaagaaaagcttgtgctgtcttctaaatcc
ctccagaactacatcatgccttatgctacaactgcaattttcactgaaaaaatgcttaag
catgaaaacatggtaacagcctcagttgaagttgttggagctgtctgccgacacctttcg
tggtcagcctatttgtaccacttaaagcacttcatccatgtcttgcaaacaggacagatc
ggtacaaagctgggagtcagcttgttagagacagtgctggaagcctttcactttgaccat
aaaacacttgaaaagcagcttgtgaccattgacaaccaagaaactgctgccatggacctc
gagccagtggtggaggctgaagaagccatggagctggagcagagtgaaggggaagaggag
gaagctgaagaaaagaatgggaagaatccctctgagaagccagtagaacctgagcaagca
gctgagccatctgaaaatgctgaacaagtgcccaaacctgtttcgttcttaccccgaaat
aaagaggagcttcagtgtctgatcaaacacattcaagaaacagttacagtcaacatcttg
cctaaattgcacaggtgtattgttgcaaaggttaaaagagacgaggagcacaagcttgtg
aaatccaatgttgtgaatgatgatgaggtagttcgtgttccattagcttttgcaatggtc
agaatgatgcagtgtcttccccaggaagtgatggaagccaacctaccaagcatcctgctg
aaagtctgcacattcctgagaaacagatttcaggaaatacgggacattgcccgcaacacc
ctcattaaaatcatggaagtgttgggagtgcactaccttctgtatatcttaaaggagatg
cggtctgcgctcatccatggctaccagctccatgtgctgactttcactgtgaacctgtta
ctgaagggccttactaccaggctcagtgctggtgatttggacccctgcttagatatcctg
attgagatattcaaccaagagttgtttgggaatgtagctgaagagaaagaagtgaaggga
attgtctccaagatcatggaagcgcgcaaaaacaagagctacgattcctatgaaattctt
gggaagttcataggaaggggccaggtgacaaaacttattctaccactgaaggagactctg
gagagcaccacaagcttgaagatagtccggaaggtgcatgaggcactgcgtcacatcatg
gcagggctcatcttcaactcagacatgaatgcagaatccctcctcctcctcagtcatggt
cttatcagtgaaaatttgcctctgctcactgagaaggccaagaaaaaagctacccctcct
ccagaccctcgactgcaaccagagagctgcctgctgctccagcccactcccacaagagga
gggcagaaagctcgtgtcagcagcaggactaacacatatatcctggttgattcaggactt
cggctactgcacatgagcctgaagagatccaaagtaaattcttctgaggaacatgctttg
gaaatgttagacccttttgttcagctgcttatagactgcctgaaatctatggatgtcaag
gttataactggtgctctgcagtccttggtatggattttaaagtttcctttgccttctgtc
ggtacgaatatggagtcactaatcaagcagcttttcctcttgctgaaagaatttgccaag
accggaatagccaaaggccagaatttccacctggttgtgagctgtttcaaatgtgtaacg
atacttgtgaagaatgcaaagagtcagataacaagcaaacagctccaagtgttgcttggc
tttgctgaagaagacatttatgattcatcacgccaagccactgcctttggccttctcaag
gctattttatccaggaagctgattgtccctgaaattgatgatgtgctgcagaaggttgcc
cagcttgccatcacgggtcagagtgagccagtgcgagtccagtgcaggcagatttattta
aaatacattctggattaccctcttggtgacaaactgaaacccaatttggatttcatgctc
gcacagctggagtatgagtatgaaactgggagggaatctgcactggagatgattgcgtac
ctcctcgacacgtttccacgggatctcctgcacaaatactgtgggctgttttttctctct
ctttgtatgatgatgataaatgatgactcagccaaatgcaaaaagatggcggctttgaca
tgtaaatctcttctccgtaagatcagcaatgaaaaacaagatctgatgttttcactggtc
actgagtggtttcacagcaaaaagagctcacacaggaggttggctgcccaggcatgcggt
ttgtttgttgaagtggacggagtaatgtttgaacggcgccttgccgcagtcctcactttg
attgaaaaagaaatcaacccaagtagatttgaaaatataactgaagaagaagaggagaag
gctgcagataggctgctattcagctttcttgtgctggtaaaaaagctaatcacggagtgc
aacttgattcagttaaccaagcacagtgatgttgtgagcaggatctgggatcatgtccag
tctcacctgtggtatccccatagctgggtctggctgacagccactgagatctttggcttg
ttgtttgcatcttataagccagaagatcttgtcaacaaatggaaggaaagaaagtcaggg
aagagaaaaaagacaccagcagagctgtctgcatccacagtcttcttgactgctgaactg
gacaaaaagatgaaggaactcgcgtttgcattctgccatcagctgcagtccaagttcctg
gacttgtctctgagtgagcaggttataaagaatttactttttgtggccaaagttgtttat
ttgctagctcctgcctcagaaggtaaagaggcagatggagagctcaggtgtgaagtggaa
gagcaggaggtctcagaggatgagagagatacttctgctcaaggagaggaagaaagagag
gacacacaagagaaaggccagccagccacactgctgtggttaatgaagaagctctctgtc
atggggaagagagaagcagcatattccccgaaggtccctttaaagagaagctgcatcttt
aagttcctgggagcaatctcagtggatctggggcaagacaggatcaagccctaccttcca
acaattctcacccctctgtacagggagctgaacagcaactatgcagagcaagatccaaca
ctgaagaacctttcccaagaaatcatagaacttctcaagaagttagtggggctggaggcc
ttttcgctggccttttcttctgtgcagaaacaggccaaccagaaaagagcaatgaggaaa
aagcggagggctttgcagactgtagcaaatcctgacattgctgcaaggaggaagctgaag
agacacaagaataaagcagaaaccaggaaaagaaaaattgaatccctgcgtcctatgtac
aaggccaagcgacatcgaagtaatgccctaaaagatttggcaatggtggaatga
DBGET
integrated database retrieval system
