Geospiza fortis (medium ground-finch): 102034793
Help
Entry
102034793 CDS
T03755
Symbol
UBE3B
Name
(RefSeq) ubiquitin protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102034793 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102034793 (UBE3B)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102034793 (UBE3B)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
HECT type E3
102034793 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
102034793
NCBI-ProteinID:
XP_005424103
UniProt:
A0A6I9HL55
LinkDB
All DBs
Position
Un
AA seq
1070 aa
AA seq
DB search
MFSASQSSRAQFLDKARQAREERRELKERERAAVQLQALVRRFLCRCHLQRDIRREVDDF
FGTNECGSSKRSALSVFKIARKLLFVFNPKEDKERFEKLCRCILNSMDVENEPKVWYVSL
ALSKDLTLLWIKQIKDILWFCCEFLKQLKPDILQDSRLVNLHLTMLVTFTDTSTWKILRG
KGETLRPAMNHICANIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGSLTAIFSLALRPV
VAAQFSDNLLRSFLIHVMSVPAIMTHLATLTPERLAVMESHDLFRKFILFLSRESQCRDV
CVCLEGSHTLCLLGNLVFLGSLNDQVLEEETAHFVGVLIQMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLLTKQLQHLWGVHMIRILFSDVLSKKLLENQEIAQLPAQPI
SPQNSLPMKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLTTLTQIR
LQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRH
LITILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENARGETLELFHSVHGWL
MVLYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDKKRAQLLLQYIPHVIPHKNRVLLFR
NMVTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQNAMKGVIRVKFVNDL
GVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFV
GKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDG
DISDLGLTLSYDEDVMGQLVCHELVPGGKTIPVTNENKISYIHLMAHFRMHTQIKSQTSA
LIGGFRAIIKPEWIRMFSAPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWD
ILANDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGF
FTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgccagccaatcctccagggcgcagttcctggacaaggcgcggcaggcgcgg
gaggagcggcgggagctgaaggagagggagagagcagcagtgcagctccaggccctggtc
aggaggtttctgtgtcgctgccacctgcagagggacatcaggagagaggtggatgatttc
tttgggacaaatgaatgtggctcaagtaaaagaagtgccctgtctgtgttcaagattgcc
aggaagctgctgtttgtgttcaatcccaaggaggacaaagagaggtttgaaaagctgtgc
cgttgtatcctgaacagcatggatgtggagaacgagcccaaggtgtggtacgtgtcactg
gcactctccaaggacctcacactcctctggatcaaacagatcaaagacatcctgtggttt
tgctgcgaattcctcaagcagctcaagcctgacatcctgcaggactccaggctggtgaac
ttgcacctcacaatgctggtcaccttcacagacacttccacctggaaaatcctccgggga
aaaggtgagaccctgagacctgccatgaaccacatctgtgccaacatcatgggccacctg
aaccagaagggcttctactccgtgctgcagattttgctaactaatggcttggcaagatcc
agaccttccctgtccaaaggttccttaactgccatcttctccctcgccttgcgccctgtg
gttgctgcacagttctcagacaatctgctgaggtccttcctgatccatgtcatgtctgtg
cctgctataatgactcaccttgctactctcacccctgagcgcctggcagtgatggaatcc
cacgatctcttccgcaagttcatcctgttcctgagccgggagtcgcagtgccgggatgtg
tgcgtgtgcctggagggcagtcacaccctctgcttgctgggcaatctggtgttcctgggc
tccctgaatgaccaggtgctggaggaggagacagctcattttgtgggggtgctcatccag
atgctctcctactgccagaagtacgtgtcccagaagaaatccaacctcacccactggcac
cctgtgctgggctggttctcacagactgtggattatggactgaacgagtccatgcccctg
ctgaccaagcagctgcagcacctctggggggtccacatgatccgcatcctcttcagtgat
gtgctcagcaagaaactgctggaaaatcaggagatagctcagctgccagcacagccaatc
tcccctcagaacagccttcctatgaaaaacctgttcaagagagctttccagaagtcagcc
tcagtcaggaacatcctgaagccggtgggagggaagcgtgtggactctgccgaggtgcag
aaggtttgcagcatctgtgtcctgtaccaaaccaccctgaccaccctcacccagatccgc
ctgcagatcctcacaggtctcacttacctggatgatctgctgcccaaattgtgggctttc
atctgtgagctgggaccacagggagggctaaaactctttttggagtgcttgaacaacgac
acagaggaatccaagaggctgctggccatgttgatgctcttctgtgactgctcccgtcac
ctcatcacgattctggatgacatcgaggtctacgaagagcagatttcattcaaactggaa
gagctggtgaccatctcctctttcctgaattcctttgtgtttaagatgatctgggatgga
attgtagagaatgcccgaggggagaccctggagctgttccattctgtgcatggctggctc
atggtgctgtacgagcgggattgtcgccggcgcttcgctcccgaggatcactggctgcgc
aaggacctcaaacccagcgtgctcttccaggagctggacaaagacaagaaacgagcccag
ctgctcctgcagtacatcccacatgtcattccccacaagaacagggtgctgctcttccgg
aacatggtcaccaaggagaaggagaagctggggctggtggagacgagctcggcgtcccct
cacgtcacccacatcaccatccgccgctcccgcatgctcgaggatgggtacgaacagctc
cggcagctttcccagaacgccatgaagggagtgatcagggtgaagtttgtcaatgacctg
ggggttgatgaggctggtattgatcaagatggggtcttcaaagagttcctggaagagatc
attaaaaaggtgtttgaccctgcactgaacctgttcaagactaccagtggcgatgagagg
ctgtatccatccccaacatcctacatccatgagaactacttgcagctctttgagtttgtg
gggaagatgcttgggaaggctgtgtatgagggaatagttgtggatgtgccatttgcttcc
ttctttttgagtcagctccttgggcaccaccacagtgtcttctacagctccgtggatgaa
ctgccctccttggactcagagttctataaaaatctcacctcaattaagcgttatgatggt
gatatcagtgacctgggcttgacactgtcctatgatgaagatgtgatgggtcagctggtt
tgccatgaacttgttcctggagggaagaccattcctgttaccaatgaaaataagatcagc
tacatccacctgatggctcatttccggatgcacacccagatcaagagccagacctctgcc
ctcatcggtggcttcagggccatcatcaagcccgagtggatccgcatgttctccgcgccc
gagctgcagcgcctcatctccggggacaacgccgagatcgacctcgaggacctgaagaaa
cacacggtgtactacgggggcttccatggcagtcaccgtgtcatcatctggctctgggac
atcctggccaacgacttcagccctgaggagagagccatgttcctcaagtttgtcaccagc
tgctccaggcctccacttctgggctttgcctacctcaagcctcctttctccatccgctgc
gtggaagtgtctgatgaccaggacacgggggacaccctgggcagcgttttgcgcggtttc
ttcaccatccgcaagaaggagccgggcgggcgcctcccgacctcctccacgtgcttcaac
ctcctcaagctccccaactacagcaagaagagcatcctgagggagaagctgcgctacgcc
atcagcatgaacaccggcttcgagctgtcctag
DBGET
integrated database retrieval system
