Geospiza fortis (medium ground-finch): 102034801
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Entry
102034801 CDS
T03755
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element binding transcription factor 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102034801 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102034801 (SREBF1)
04131 Membrane trafficking [BR:
gfr04131
]
102034801 (SREBF1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
102034801 (SREBF1)
Membrane trafficking [BR:
gfr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102034801 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
102034801 (SREBF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
GIP4
bHLH_LHW
SAD_SRA
Motif
Other DBs
NCBI-GeneID:
102034801
NCBI-ProteinID:
XP_014164503
LinkDB
All DBs
Position
Un
AA seq
1048 aa
AA seq
DB search
MVSQGILPLDYGDLPPKCYTAGRAGRDQPKAALGGAGQRLTALGVCFTDMLQLINTPDND
FSGLFDSPFSAPDSAVPPGLPSTPGTLNTFLAPSKPPPAPPAPLLPAPSLGVKEEPSVVP
SSQPQPQPGVMLAPSFVPASPSPFSPQPLVGYQNQHSFSAVQPGSAGQTLPSPLPTPQPS
QPVTLPGPVQNVAPQQLLAPAAAPSTQSVSPQIQSVPVLLQPHFIKADSLLLTAVKTDAS
SAKTCPXSASGSAAPLQVPALVSGGTILATVPLVVDAEKLPINRLVPSGKPALLQSRGEK
RTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAILRKAIEYIRFLQQSNQKLKQEN
LALKMAMQKNQPVKDLGTHCSRGAKAEAPMEVAKAEVMEMLTPPPSDVGSPSHSSPLSLS
GGSSNSSSSDSEPESPLCAHGKVKQEHPPPSPSSQGMLDRSRMALCAFVFLCLSFNPLAS
LLRGSASPAPLGSQDTAGPGRSIMAQSGTLEDPWGWTQWLWPTLAFWALNVALVLGAVVR
LFVCGEPVTRPHSEPSILFWRHRRQADLDLDRVRPQRPLPASHGDLACSLLWTLLRHLLQ
RLWVGRWLAARAGGLPPDPPPPAHVRQSARDAAMAYHRLHQLHLAGKQAGGHLLAINLAL
SAVNLAECAGDAISVAALAEIYVAAALRIKASLHRCFHFLARPFLCSARRVALSHGGAVP
PAMQWLCHPLGHRFFVDGDWAVKGVPRETIYSSAGNPVDPLAQVTQLFREHLLEKALCCV
AMPEPGRPTAQGEGRVSDALEYLQLLNGCSDVSGTPGPTPSITSGLAAVTGEAGTDPVSK
WWASFIGIVIHWLQGDEEGAERLYPLVETMPRALQSSEKPLPRAALPSFRAVRALLSKQD
GSQATLGHCEKASSCLRESLELGSPPKGTIDKAVQLLLCDLLLVTRTNLWQQQMGASQQR
SCLYQASALELRGFQQDLSSLRRLAQSLRPAMRRVFLHKATARLMARASPTRTHQLLDRS
LRRRGVQGSKTAGEPESHPTAREKINIF
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccagggaattttgcctctggattatggggatctgccccctaaatgctacacc
gcggggagggcaggacgggaccagcccaaggccgccttgggaggtgcagggcagcggctg
acggcactgggggtgtgttttacagacatgctgcagctgatcaacacgccggacaatgac
ttctcgggcttgttcgactcaccgttcagtgccccggacagcgctgtgcccccggggctt
ccctccacgccgggcaccctcaacaccttcctggctcccagcaagccgccccccgcgccc
ccggccccgctgctgccggcgccgtccctgggggtcaaggaggagccgtcggtggtgccc
agcagccagccccagccccagcccggcgtcatgctggcccccagcttcgtccctgcgtcc
cccagcccgttcagtccccagcccttggtgggctaccagaaccagcacagcttctcagct
gtgcagcctgggagtgcggggcagaccctgccgagccctctgcccaccccacaacccagc
cagcccgtgacactgcctggccccgtgcagaacgtggcaccccagcagctcctggccccc
gctgccgcccccagcacccagtctgtgtcaccgcagatccagtcagtgccggttctcctg
cagccccatttcatcaaggctgactccctgctgctcacggccgtcaagacagacgccagc
agcgccaagacctgccccnccagcgccagcggctcggccgccccgctccaggtgccggcg
ctggtgagcggagggaccatcctggccacggtgccgctggtggtggatgcggagaagctg
cccatcaaccggctggtgcccagcgggaaaccggcgctgctgcagagccgcggcgagaag
cgcacggcccacaacgccatcgagaagcgctaccgctcctccatcaacgacaagatcgtg
gagctcaaggacctggtggtgggcaccgaggccaagctcaacaagtcagcgatcctgagg
aaggctatcgagtacatccgcttcctgcagcagagcaaccagaagctgaagcaggagaac
ctcgccctgaagatggccatgcagaagaaccagcctgtgaaggacctggggacccactgc
agccggggggccaaggcagaggcccccatggaggtggcgaaggcagaggtgatggagatg
ctgacaccgccgccctcggacgtgggctcaccatcccacagcagcccactctcactcagc
ggtggcagcagcaacagcagcagcagcgactcagagcctgagagccccctctgtgcccat
ggcaaggtgaagcaggagcacccaccaccctcgcccagcagccagggaatgctggaccgc
tcccgcatggccctctgcgccttcgtcttcctctgcctctccttcaaccccctggcctcc
ctgctccggggttctgcctccccagcccccctggggagccaggacaccgctggtcccggc
aggagcatcatggctcagtctggcactctggaggacccatgggggtggacgcagtggctg
tggcccacactggccttctgggccctgaacgtggcgctggtgctgggcgcggtggtgcgg
ctctttgtctgcggggagcccgtcactcgcccccactccgagccctccatcctcttctgg
cggcaccgccggcaggccgaccttgaccttgaccgggtacgtccccagagacccctgccg
gcgtcccacggggacctggcctgcagcctgctctggaccctcctgcgccacctgctccag
cgcctctgggtgggtcgctggctggctgcccgcgccggggggctgcccccggaccccccg
ccccctgcccacgtccgccagagcgcccgcgacgctgccatggcttatcaccgcctgcac
cagctgcacctcgccgggaagcaggctgggggacatctgctggccatcaacctggccctg
agcgctgtcaacctggctgagtgcgccggtgacgccatctctgtggcagccctggctgag
atctatgtggcggctgctctgcggatcaaggccagcctgcaccgctgcttccacttcctg
gcgcgtcccttcctctgcagtgcccggcgcgtggccctgtcccacggcggggccgtgccc
cccgccatgcagtggctctgtcaccccttgggccaccgcttctttgttgatggggactgg
gcagtcaagggcgtccccagggaaaccatctacagctccgccggcaacccagtggacccg
ctggcccaggtgacccagctcttccgtgagcacctcctggagaaggcgctgtgctgcgtg
gccatgcctgagcccggccgtcccactgcccagggagaggggcgggtctccgatgccctc
gagtacctccagctgctcaatggctgctcggatgtcagtggcacccctggccccaccccc
tccatcacctccggcttggcggctgtcacaggggaggctggcactgaccccgtgtccaag
tggtgggcgtccttcatcggcatcgttatccactggctgcagggagatgaggagggggct
gagcgcctctacccgctggtggagaccatgccccgggcactgcagagctctgagaagccc
cttccccgtgctgccctgccctctttccgagctgtccgtgccttgctgagcaaacaggac
gggagccaggccaccctgggccactgtgagaaggccagcagctgcctgcgggagagcctg
gagctgggcagcccccccaagggcaccatcgacaaggcagtgcagctcctgctctgtgac
ctgctgctggtcacccgcaccaacctgtggcagcagcagatgggggcgagccagcagcgc
agctgcctctaccaggcgtccgccctggagctccgcggcttccagcaggacctgagcagc
ctgcggcgcctggcacagagcctgcgccccgccatgcgccgggtgttcctgcacaaagcc
actgccaggctgatggcccgggccagccccacgcgcacccaccagctgctggaccgcagc
ctgaggaggagaggggtgcagggcagcaaaacagctggcgagccagaaagccaccccacg
gcccgggagaaaataaacatcttttag
DBGET
integrated database retrieval system
