Geospiza fortis (medium ground-finch): 102034804
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Entry
102034804 CDS
T03755
Symbol
ZC3H12B
Name
(RefSeq) zinc finger CCCH-type containing 12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102034804 (ZC3H12B)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102034804 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102034804
NCBI-ProteinID:
XP_005427878
UniProt:
A0A6I9HPW7
LinkDB
All DBs
Position
Un
AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRGSAQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSSTGTLVSRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggagcaagatgcgggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgagcctgagcaaccatacttcagaggcagtgctcagtggagagaaaaggaggtt
tccaccaaaccgcatcggccgctctgccggtccccatgcctggatcgcccaagtttttca
cagagtagtatcacacaagacttgaagctagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcagatccaggct
gtactgaataagttgggagcggatgcgctcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcagtagcactggtactctg
gtgtcaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactggaagatgaa
gtggtggataacagtgataacttgaggccaattgtcattgatggaagcaatgttgctatg
agccatgggaacaaagaaggattttcctgccggggaattcaactagctgttgattggttt
ttggaaaaaggacataaagacatcactgtgtttgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaagaaaaaatt
cttgtttttaccccatctcgaagagttcagggaagaagagtagtttgctatgatgatcga
ttcatagtaaaacttgctttcgactcagatggcatcattgtgtccaatgataactatcgg
gatcttcagaatgaaaaaccagaatggaagaagttcatagaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgtcatggtccaagc
cttgaaaattttttaagaaaaaggccagttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgagtcactgggggac
catggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttat
ggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccacttaggcctacat
gcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aacgttcatccatcaactgcacaaccaagccgtgccttggtgatgacaagaatggacagc
atttctgactctcggctttatgagagtaaccccacgaggcagagacggccacctctgtgt
cgggagcagcacgccagctgggatccactgccctgtgcatcagactcctacacttaccac
tcctacccactgagtaacaacctcatgcagccatgttatgaacctgtcatggttagaagc
atgcctgagaagatggaacagctctggagaaatccctggattgggatatgtggtgagcca
cgggaacctcatatcatcccagaacatcagtatcaaacgtacaagaacctctgcaatatt
ttccctccaagtgttgtcctttctgtgatggagaagaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacagggcgttag
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