Geospiza fortis (medium ground-finch): 102034870
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Entry
102034870 CDS
T03755
Symbol
GLI1
Name
(RefSeq) GLI family zinc finger 1
KO
K16797
zinc finger protein GLI1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102034870 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102034870 (GLI1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
102034870 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
zf-C2H2_16
zf_ZIC
Motif
Other DBs
NCBI-GeneID:
102034870
NCBI-ProteinID:
XP_014166370
LinkDB
All DBs
Position
Un
AA seq
956 aa
AA seq
DB search
MFDPAGPPAAGYSEHCCLHAPHGAAPAAPGPPGLDFPVCHQPGHRGYGLAAGAEHPGDGS
RFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASAGGSYGHLSI
STISPSLGYQSPPGQQKGQGHLYTPPPPCSSHEVPTRGGLLHHPPARGALKHCQQLKLEW
SLSSPLSAKFPEERSEGDISSPASTGTQDPLMGMLDVREELEKEDGKPECEAVYETNCYW
DGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEK
PHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVGPGRALPTPSAPLDMKQE
KEANGPSEARKDDGKLLVPELALKPQPSPGGQSSCSSDHSPLGSTTNNDSGVEMAGNAGG
SYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQLRKPAASKGLNLPPIPGAGDAG
GLPGGGSLTPAQRYRLKAKYAAATGGPPPTPLPSVEQVAPGGHGGTPGGYPVPAGPRCIA
NGFVRRNSSNENPGYPGSVPAHLVSRHGVRRASDPAQTVAKPPAVPRVQRFKSVGNVSMP
GAGRTVLQPLGGSEANLQRHGFSPRPPSITENVFMESMGGPGPESSLLDMEQYLSYPEES
FPCQATGVELQGGIYGTHRTMVGTHGDMEEGLLQPEFSLPQCQMNQHFPSLPTGNNGAVP
EPWDGPPQSTLSMSSRQGVGAPTMSGPHCPHQNIEYPHPSACGQHPKLVSSCQDQEFSGG
HRFNRLQIKSEQRYPAPSPALAPCPSTKLAGPSASPAAFGHTMDVGQGGYPPVGHTPGGY
MGMASPGARRAQTPTLQSKEVMVRNYVEAQQALMWGEQQPPSPFCESTSSATPSPH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccccgcgggacccccggccgccggctacagcgagcactgctgcctgcacgcc
ccgcacggagcagcccccgccgccccgggaccaccagggctggatttccccgtgtgccac
cagcccgggcaccgcgggtatgggctggcagcaggagctgaacaccccggggatggctcc
cgtttctccacgccccgaggcgcagggaagctgggcaagaagcgagccctgtccatctcg
cccctgtccgactccagcatcgacctgcagaccgtgatccgcacctcgcccaactccctc
gtggctttcatcaactcccgctgcgcctctgccggcggctcctacggtcacctgtccatc
agcaccatcagcccgtccctggggtaccagagcccacctgggcagcagaagggccaaggg
cacctgtacacgccacccccaccctgcagctcccacgaggtgcccacacgtggggggctg
ctgcaccacccacctgctcgaggggcactgaaacactgccagcagctgaagctggagtgg
agcctgagcagccccctgagtgccaaattcccagaggagcgatctgagggtgacatctcc
agcccagcatccacgggcacccaggaccccctgatgggcatgctggatgtccgggaggag
ctggagaaggaggatggcaagcccgagtgtgaggctgtgtatgagaccaactgctactgg
gacggctgtgccaaggagttcgacacgcaggagcagctggtgcaccacatcaacaacgag
cacatccacggcgagaagaaggagttcgtgtgccactgggcagcgtgctcgcgggagcag
aggcccttcaaggctcagtacatgctggtggtgcacatgcggcgccacacgggagagaaa
cctcacaagtgcacgtttgagggctgcaacaaggcctattcccgcctggagaacctcaag
acccacctgcgctcgcacacgggggagaagccctacgtgtgtgagcacgaggggtgcaac
aaagccttctccaacgcctccgaccgcgccaagcaccaaaaccgcacccactccaacgag
aagccctacgtgtgcaagattcccggctgcaccaagcgctacacagaccccagctcccta
cgcaaacacgtcaagaccgtgcacggccccgacgcccacgtcaccaaaaagcaccggggg
gacgtggggccgggccgggcactgcccacccccagtgcccccctggatatgaagcaggag
aaggaggcaaacggccccagcgaggctcggaaggacgatgggaaactcctggtgcccgag
ctggccttgaagccccagcccagcccaggtgggcaatcctcgtgcagcagcgaccactca
cccctgggcagcaccaccaacaacgacagcggcgtggagatggcaggaaacgccggtggc
agctacgaggacctgtccactctggaggacgtggtgcctggggagcccatgggcacctcg
gggctcatggccctccacaaactggaaaaccttcgcatcgacaagctgaagcagctgagg
aaaccggcggcttccaagggcctgaacctgccacccatccctggagctggtgatgccggg
gggctgccgggggggggcagcctgaccccggcacagcgttaccgcctcaaggccaagtac
gctgcggccacgggcggccccccgcccaccccgctgcccagcgtggagcaggtggcacca
ggtgggcatggtggcactcctggaggttaccccgtgcccgctgggcctcgctgcatcgcc
aacggctttgtgagaaggaacagctccaatgagaaccccggttatccaggcagcgtgccc
gctcatctggtgtcccgacacggtgtgcgacgggcaagtgaccctgcccagacggtggcc
aagcctccagccgtgcccagggtgcagaggtttaagagtgtggggaatgtgagcatgcca
ggcgcgggcaggacagtgctgcagcctctgggtgggtctgaggccaacctgcagcgccat
ggcttctccccacgcccccccagcatcactgagaacgtcttcatggaaagcatggggggt
cctggccccgaatccagcctgctggacatggagcagtacctgagttatcctgaggaaagc
ttcccctgccaggccactggtgtggagctccagggtggcatctacggcactcaccggacc
atggtggggacgcatggggacatggaggaggggctgctgcagcctgaattctccctccct
cagtgccagatgaaccagcacttccccagtttgcctactgggaacaatggggccgtgcca
gagccctgggatggacccccccagagcacgctgagcatgagctccaggcaaggtgtgggc
gctcccaccatgtctgggccacactgtccccatcaaaacatcgagtacccccaccccagc
gcctgcgggcagcatcccaaactggtgagctcatgccaggaccaagaattttcggggggg
catcggtttaaccggctccagatcaaatccgagcagcgatacccagcgccgagcccagca
ctcgctccctgccccagcaccaagctggccgggccctcggcatcccccgctgcctttggg
cacaccatggacgtggggcagggtgggtacccccctgtggggcacacaccgggcgggtac
atgggcatggccagcccaggtgcccgcagagcccagacccccaccctgcagagcaaagag
gtgatggtccggaactacgtggaggcgcagcaggcgctgatgtggggggagcagcagccc
ccctctcctttctgtgagagcaccagcagcgccaccccctcccctcattaa
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