Geospiza fortis (medium ground-finch): 102034926
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Entry
102034926 CDS
T03755
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102034926 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gfr04812
]
102034926 (SPTBN4)
Cytoskeleton proteins [BR:
gfr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102034926 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
102034926 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CH_2
MG280
Motif
Other DBs
NCBI-GeneID:
102034926
NCBI-ProteinID:
XP_005431506
UniProt:
A0A6I9HTI9
LinkDB
All DBs
Position
Un
AA seq
1244 aa
AA seq
DB search
MASPSSFCIAFIIIEKKTFTKWVNAHLARAACRVGDLYSDLRDGFVLTRLLEVLSGETLP
KPTRGRMRIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQV
IKIKTEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLID
FHKLTKSNATYNLQQAFNTAEQHLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMK
ALAVEGKRIGKVLDQVMEIAAITARYEALAAELLAWIHHTITIITNQKFANSLTGVQQQL
QAFTAFCTLEKPVKFQEKGNLEVLLFTIQSKLRATNRKLYVPSEGKSISDINKAWTCLEK
AEHEREVALRNELIRQEKLELLAQRFDHKAVMRETWLNENQRLVSQDNFGYDLPAVEAAM
KKHEAIEADISSYQERIQVVVELALEMESEGYYDTRRIGAQKDNILRQWALLTELVRARR
ARLEQNLALQKIFQEMVYMIDWMEEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADISAQT
ERVQALNAAALKFSELEGYQPCDPQIICNRVNHVQTCLEELEELAAKRRKELEDSRQLWT
FFQEMEEAEAWIREKEKILAAKSCGRDLSSVLTLTNKHKTMLGELGNRRALLHQTMKKGE
KILAKKSFSSVGIQEKMREVCLRWKKLEEITGLHQQRLEDALNFFQFSAETDDLVAWLQD
IYRIVSSDDFGHDDYSSQALLRKHRAVVDEVEKHRAAVLALRKQLALLAPDHRQGVDIQI
RVVEVEQLYGEVAEVAVLRTQWLQDALAVYRMFSEVHACEVWVDEKEQWLEKMEVPEELD
EVEVVQHRFESLDQEMNSVMGRILDVNQVVQQLVDGGHPSSDEVRSCQDHLNSRWNRVVE
LVENKKSQLSSVLKIQNFLLECSEMKAQVREKRKAIEATQSGGSDLGGVLALQRRLSTME
AALVVLEPRLVELQQEGEALAAAHPGRALDILLPFEEISEEWDNLKRALQGCEDTLTIAG
RLQQFIQDLDNFLGWLVKTQAAVGSEEVPDSLAEAERLLNVHVALKEEINGYEEDYAKIQ
AASELLALEEMEVPSLSLQQWLQKLDAGWGKLLQSWEMRRELLVQSHVFHLFLRDVQQCQ
SSLYNQEATLAHAELPDTVEGVTKALKKHKDFTTTLELNLQKVQLVLQAGESLRRQRNLH
SDRVAEAMEGLRAKSQRNHQLAQEWTRRLQDHLELQRFLQDCRE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccgtcatcattctgtatcgccttcatcatcatcgagaagaagaccttcacc
aagtgggtgaacgcccacctggcgcgcgccgcctgccgcgtcggggacctctactcggac
ctgcgcgacggcttcgtgctcacgcggctgctcgaggtgctctcgggggagaccctgccc
aagccgacgcggggccggatgcggatccactccctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtccacctggagaacgtcggctcccacgacatcgtggacggc
aaccaccgcctgaccctcggcctcatctggaccatcatcctccgcttccagatccaggtg
atcaagatcaagaccgaggacaaccgggagacgcgctcggccaaggacgcgctgctgctc
tggtgccagatgaagacggcgggctaccctgaggtcaacatccagaacttcaccaccagc
tggagggacggcctggccttcaacgccctcatccacaggcaccggccggatctcatcgac
ttccacaagttgaccaagtccaacgccacctacaacctccagcaggccttcaacacggcc
gagcagcacctggggctcagcaagctgctggaccctgaggatgtcaacatggaggacccc
gatgagaagtccatcatcacctacgtggtgtccttctaccactacttctccaagatgaag
gcgctggcggtggaggggaagcgcatcgggaaggtgctggaccaggtgatggagatcgcg
gccatcacggcgcgctacgaggcgctggcggccgagctgctggcctggatccaccacacc
atcaccatcatcaccaaccagaagttcgccaactcgctgaccggcgtccagcagcagctc
caggccttcaccgccttctgcaccctggagaaacctgtcaagttccaggagaaggggaac
ctcgaggtgctgctcttcaccatccagagcaaactccgggccaccaaccgcaagctctac
gtgcccagcgagggcaagagcatctccgacatcaacaaggcctggacgtgcctggagaag
gcggagcacgagcgggaggtggccctgaggaacgagctgatccggcaggagaagctggag
ctgctggcccagcgcttcgaccacaaggccgtcatgagggagacgtggctcaacgagaac
cagcgcctggtctcgcaggacaacttcggctacgacctgccggcggtggaggcggccatg
aagaagcacgaggccatcgaggccgacatctcctcgtaccaggagcgcatccaggtggtg
gtggagctggccctggagatggagtccgagggctactacgacacgcggcgcatcggcgcc
cagaaggacaacatcctgcgccagtgggcgctgctgaccgagctggtccgcgcccgccgc
gcccgcctcgagcagaacctggccctgcagaagatcttccaggagatggtctacatgatc
gactggatggaggagatgcaggttcttctggtctccaaggatttggggaagcatctgctg
gaggttgaggacctcctgcagaagcacgggctgctggaggccgacatctcggcgcagacc
gagcgcgtccaggccctcaacgccgccgcgctcaagttctcggagctggagggctaccaa
ccctgcgacccccagatcatctgcaaccgcgtcaaccacgtccagacgtgcctggaggag
ctggaggagctggcggccaagaggaggaaggagctggaggactcccgccagctctggacc
ttcttccaggagatggaggaggccgaggcctggatccgcgagaaggagaagatcctggcc
gccaagagctgcggccgcgacctcagcagcgtcctgaccttgaccaacaagcacaagacc
atgctgggcgagctgggcaaccgccgggctctgctccaccagaccatgaagaaaggcgag
aagatcctggccaagaaatccttcagctccgtgggcatccaggagaagatgcgagaagtc
tgcttgaggtggaagaagctggaggagatcacggggctccaccagcaacgcttggaggac
gccttgaacttcttccagttcagcgccgagacggacgacctggtggcctggctgcaggac
atctaccgcatcgtgtccagcgacgacttcggccacgacgactactccagccaggcgctg
ctgcgcaagcaccgcgccgtggtggacgaggtggagaagcaccgcgccgccgtcctggcc
ctgcgcaagcagctggctctgctggcccccgaccaccggcagggcgtggacatccagatc
cgcgtggtggaggtggagcagctctacggggaggtggccgaggtggccgtgctgaggacg
cagtggctgcaggacgcgctggccgtctaccgcatgttcagcgaggtgcacgcctgcgag
gtgtgggtggacgagaaggagcagtggttggagaagatggaggttcctgaggagctggat
gaggtcgaggtggtgcagcacaggtttgagagcctggaccaggagatgaacagcgtcatg
gggcgcatcctggacgtcaaccaggtggtgcagcagctggtggatggtggccaccccagc
tccgacgaggtccggtcctgccaggaccatctcaacagccgctggaaccgggtggtggag
ctggtggagaacaagaagagccagctgagctccgtgctgaagatccagaacttcctcctg
gagtgcagcgagatgaaggcgcaggtgcgggagaagaggaaagccatcgaggccacccag
tccggtggcagcgacctgggcggggtcctggccctgcagcgccgcttgtccaccatggag
gccgccctggtggtcctggagccgcggctggtggagctccagcaggagggcgaggccttg
gccgccgcccaccccggccgcgccctggacatcctgctgcccttcgaggagatcagcgag
gagtgggacaacctcaagagggccctccaaggctgcgaggacaccttgaccatcgccggc
cgtctccagcagttcatccaggacctggacaacttcttggggtggttggtgaagacccaa
gcggccgtgggctccgaggaggtccccgacagcttggccgaggccgagaggctgctgaac
gtccacgtggccctcaaggaggagatcaacggctacgaggaggactacgccaagatccag
gcggccagcgagctgctggcgctggaggagatggaggtgccctcgctgtccctccagcag
tggctgcagaagctggacgcgggctgggggaagctcctgcagagctgggagatgaggagg
gagctcctggtgcagtcccacgtcttccacctcttcctgagggacgtgcagcagtgccag
agcagcctctacaaccaggaggccacgctggcccacgccgagctgccggacacggtggaa
ggggtgaccaaggcgctgaagaagcacaaggacttcaccaccacgctggagctgaacctg
cagaaggtccagctggtcctgcaggccggcgagagcctccggcgccagcgcaacctccac
agcgaccgcgtggccgaggccatggaggggcttcgggccaagagccaacgcaaccaccag
ctggcccaggagtggacgcggcggctccaggaccacctcgagctccagaggttcctccag
gactgtcgcgag
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