Geospiza fortis (medium ground-finch): 102035035
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Entry
102035035 CDS
T03755
Symbol
GATAD2B
Name
(RefSeq) GATA zinc finger domain containing 2B
KO
K23194
transcriptional repressor p66
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102035035 (GATAD2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102035035 (GATAD2B)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102035035 (GATAD2B)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102035035 (GATAD2B)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
102035035 (GATAD2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
DUF4004
Motif
Other DBs
NCBI-GeneID:
102035035
NCBI-ProteinID:
XP_014166520
UniProt:
A0A8N5I4S4
LinkDB
All DBs
Position
Un
AA seq
464 aa
AA seq
DB search
MDRMTEDALRLNLLKRSLEPAEEREDVLAKRLKMEGHEAMERLKMLALLKRKDLAGLEVP
HELPVKPDGIKGYEEKLNGSLRPHGDGRSAARPGKENINDEPVDMSARRSDQDRGRLTPS
PDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKSLEERQQLIKQLRDELRLEEARLVL
LKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKIPSRPGAQGVEPQNLRTL
QGHSVIRSAASSALPHMLMSQRVIAPSPAQLQGQRGPQKPGLVRSSTPGMSPAINYQPQS
GSSVPCQRSSSSAIYMNLASQLTPNPHPDPKSPPXSQIPHLTPISAAANSQAAAKLALRK
QLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKSAPAVPRVEPF
VCAQCRTDFTPHWKQEKGGRILCEQCQTSNQKKALKAEHTNRLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcatgacggaggacgcgctgcgcctgaacctgctcaagcggagcctggagccg
gcggaggagcgcgaggacgtcctggccaagaggctgaagatggagggacacgaggccatg
gagaggctgaagatgctggcgctgctcaagcgcaaggacctggcggggctggaggtgccc
cacgagctcccggtgaagccggacgggatcaagggctacgaggagaagctcaacgggagc
ctgaggccccacggggacgggcggagcgcggcccggccgggcaaggagaacatcaacgac
gagcccgtggacatgagcgccaggaggagtgaccaggaccggggcaggttgaccccgtcc
ccggacatcatcgtcctgtcggacaacgaggcctccagcccccgctccagctcccgcatg
gaggagcggctcaaggcggccaacctggagatgttcaaggggaagagcctggaggagagg
cagcagctgatcaagcagctccgggacgagctgcggctggaggaggcccggctggtgctc
ctcaagaagctgcggcagagccagctgcagaaggaaaacgtggtgcagaagacccccgtt
gtccagaacgccgcgtccatcgtgcagccgtcccctgcccacgtgggacagcagggcctg
tccaagatcccctcccggcccggagctcagggcgtggagccgcagaatttaaggacatta
cagggccacagcgtgatccgctcggccgccagctcagccctgccccacatgctgatgtcc
cagcgcgtcatcgcccccagccccgcccagctccagggccagcgcgggccccagaaaccc
ggcctggtccgcagctccacgcccggcatgagccctgccatcaactaccagccgcagtcg
ggctcctcggtgccgtgccagcgctcgtcctcctccgccatctacatgaacctcgcgtcc
caactgaccccaaatcctcaccctgacccaaaatccccaccatgatcccaaatcccccac
ctgaccccaatctcggccgccgccaactcgcaggccgcggccaagctggcgctgcgcaag
cagctggagaagacgctgctggagatccctccgccgaaaccgccggcgccgctgctgcac
ttcctgcccagcgccgccaacagcgagttcatctacatggtggggctggaggaggtggtg
cagagcgtcatcgacagccaagggaagagcgcgccggcggtgccgcgcgtggagccgttc
gtgtgcgcgcagtgccgcacggacttcacgccgcactggaagcaggagaagggcgggcgg
atcctgtgcgagcagtgccagacctccaaccagaagaaggcgctcaaggccgagcacacg
aatcgcctcaag
DBGET
integrated database retrieval system
