Geospiza fortis (medium ground-finch): 102035036
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Entry
102035036 CDS
T03755
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102035036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102035036
03036 Chromosome and associated proteins [BR:
gfr03036
]
102035036
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102035036
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102035036
PBAF complex
102035036
GBAF(ncBAF) complex
102035036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
102035036
NCBI-ProteinID:
XP_014166992
LinkDB
All DBs
Position
Un
AA seq
547 aa
AA seq
DB search
MAPYEGRCPLTPVPLQIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNV
EMFMTIEKSLVYDTWIPASEIEASVEDPPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVT
DEKSPVTRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGP
STPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDL
DEQEDESMETAGKDEEENGAGSKGEQAKNPDLHEDNVTEQTHHIIIPSYAAWFDYNRYSQ
PCXGLPSRPSSPEAARGRARCXAPRAPHRYLAYRNFMIDTYRLNPQEYLTSTACRRNLAG
DVCAIMRWALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQP
IPFSQSGNPGLGAQGCGERRMGMGCGEREFSKMKEEVPTALVEAHVRKVEEAAKVTGKAD
PAFGLESSGIAGTAWIWGGDRDHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETI
MDREREA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctatgagggacgctgtcccctgacccctgtccccttgcagatcaaatgcttc
ctggatttcaaggcggggggagccctgtgccacatcctggcagccgcctataaattcaag
agcgaccaaggatggcggcgtttcgatttccagaatccctcgcgcatggaccgcaacgtg
gagatgttcatgaccatcgagaaatccctggtctatgacacctggatcccagccagcgag
atcgaggcgtccgtggaggatcccccgacaccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggattacgaggtgacg
gacgagaagagccccgtgacccgcaggaagaagatctcggccaagacgctgacagacgag
gtgaacagccccgattcggaccggcgcgacaagaagggggggaactacaagaagaggaag
cgctcgccctctccctcgcccacccccgaggccaagaagaagaacgcgaagaagggaccc
tccaccccctataacaaatccaagcgtgggcaccgcgaggaggagcaggaggacctgacc
aaggacatggacgagccctcacctgtccccaacgtggaggaggtgaccctgcccaagaca
gtcaacaccaagaaggactcggagtcagcaccagtcaaggggggcaccatgacagacctg
gatgagcaggaagatgagagcatggagacagctggcaaggacgaggaggagaacggcgcc
ggcagcaaaggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacaggtacagccag
ccctgctgaggcctcccgagccgcccttcatcacctgaggccgcccggggccgtgcccgg
tgctgagccccccgtgccccccacagatacctggcataccggaatttcatgatcgacacg
taccggctgaacccgcaggagtacctgacctccacggcctgccggaggaacctggccggg
gacgtctgtgccatcatgcggtgggccctggagatgtacaaggacgactggaacaaggtg
tcggagcacgtgggcagccgcacgcaggacgagtgcatcctgcacttcctgcgcctgccc
atcgaggatccctacctggaggactcggaggcctccctgggccccctggcctaccagccc
atccccttcagccagtcgggcaaccccgggctgggggcacaggggtgtggggagaggaga
atggggatgggatgtggggagagggagttctccaagatgaaggaggaggtgcccacggcg
ctggtggaggcgcacgtgcgcaaggtggaggaggcggccaaggtgacgggcaaggccgac
cccgccttcgggctggagagcagcggcatcgccggcaccgcctggatttggggaggggac
agggatcacctggcggccgtggaggagcgcaagatcaagtccctggtggcgctgctggtg
gagacgcagatgaagaagctggagatcaaactgaggcacttcgaggagctggagaccatc
atggaccgcgagcgcgaggcc
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