Geospiza fortis (medium ground-finch): 102035114
Help
Entry
102035114 CDS
T03755
Symbol
GABPB1
Name
(RefSeq) GA binding protein transcription factor beta subunit 1
KO
K09454
GA-binding protein transcription factor, beta
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102035114 (GABPB1)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102035114 (GABPB1)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
102035114 (GABPB1)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
102035114 (GABPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
CCDC84
LAMTOR5
CREPT
Motif
Other DBs
NCBI-GeneID:
102035114
NCBI-ProteinID:
XP_005419676
LinkDB
All DBs
Position
Un
AA seq
395 aa
AA seq
DB search
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHHHQEVV
ELLIKYGADVHAQSKFCKTALDIAVDNGNEDIAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSANTSSRTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPVKRQCIEIVENRVESAEIEERETLQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMNRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagtagatttgggaaagaaacttttagaagctgcacgagcaggtcaagatgat
gaagttcgcattttgatggcaaatggagcaccttttaccacagactggctgggaacatct
ccacttcatctagcagcacagtatggacattactccaccacagaagtgttgctgcgagca
ggtgtgagtcgggatgccagaaccaaagtggacagaactccattacatatggcagcatca
gaaggccatgccagcatagtagaagtcttacttaagcatggtgctgatgtcaatgccaag
gacatgctcaaaatgactgcacttcactgggctactgaacatcaccaccaagaagttgta
gaactcttgataaagtatggagcagatgttcatgctcagagtaaattttgcaaaacggca
ttagatattgcagtagacaatggaaatgaagacattgcagaaatattacagattgcaatg
cagaaccaaatcaatacgaaccccgagagtccggacactgtgacgatacacgcagccaca
ccgcagttcatcatcgggcctggaggggtggtcaacctaacaggtctggtatcttctgca
aatacatccagtagaacagatgaaacaggagtgtctgctgtacagtttggaaattcatca
acatcagtattagctacgttggctgctttggcagaagcatcagctccactgtctaattct
tcagaaacaccagttgtggccacagaagaagttgtgactgcagaatctgtggacggggcc
attcagcaagtggtcagttctggagggcagcaggttattaccatagttacagatggcatt
cagctgggcaacctgcattccattccaaccagtggcatagggcagcccatcattgtgacc
atgccagatgggcagcaagtgttaacagttccagcaacagacattgctgaagaaactgta
ataagtgaagaaccgccagtgaagagacagtgcattgagattgttgaaaatcgtgtggag
tctgcagaaatagaagaaagagaaactcttcagaaacagctggatgaggcaaacagagaa
gcacaaaaatatcgtcagcagcttctaaagaaggaacaagaagcagaggcctatcggcag
aagttagaggcaatgaaccgcctccagactaataaagaagctgtttaa
DBGET
integrated database retrieval system
