Geospiza fortis (medium ground-finch): 102035119
Help
Entry
102035119 CDS
T03755
Symbol
RC3H2
Name
(RefSeq) ring finger and CCCH-type domains 2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102035119 (RC3H2)
04121 Ubiquitin system [BR:
gfr04121
]
102035119 (RC3H2)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102035119 (RC3H2)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102035119 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
102035119
NCBI-ProteinID:
XP_005421298
LinkDB
All DBs
Position
Un
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALDNTKKGGKAGANGQNTSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLPYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPSEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcgtgtccctttgaccagactgccatcaacaccgac
atcgacgtgctccctgtgaactttgcactcctccagctggttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagagcagctcggtcactgggagag
agaactgtcacagaactcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttccccaggcctctaaaacaagcattggt
catgttgtgcagctgctgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaactgaaagaagagttccggagttacgaggctttgcggagagagcac
gatgcccaaattgttcacattgccatggaagcaggacttagaatatcaccagaacagtgg
tcttcccttctttatggagacctcgcacataaatcacacatgcaatccattattgacaag
ctccaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgccatggtggct
gtgaagactgtggtccatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaagtacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagcgcaacagtgagaacgttcccccttctg
aacaaagttggcgtaaacagcaccgtctcaaccaccacaggaaacgtgatctctgtcata
ggaagccctgaggcaacgggcaagatggtgccaagtactaatggaatagctaatctagaa
actggggttccccagctgatcccccgctgtgcagacacctccctgagagctctggacaac
accaagaagggaggaaaggccggggccaatggccagaacacttctggctcccccacagaa
tcacttcctgaaaataaaatcggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gaccccaggactcagctgccgtatgaagttccacagtacccacagacagggtattatcca
gcacctccaacagtaccagctggtgtagctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagcaca
tttccccctcgagaccggctgaattctccctaccagcctcctcctccgcagccctacgga
ccagtccctcctgtcccctctggaatgtacgctccagtctacgacagccggcgcatctgg
cgcccgcagatgtacccccgagacgatatcatcaggagcaattccttacctcccatggat
gtgatgcactcatctgtctatcagacatcgttgagggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctcccagcgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggacgttaaaaggagagtgcat
ttatttgaaacacagagaagggcaaaggaggaagatcctataatcccgttcagcgatgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacaggctatcacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtgtcagat
tatgtcccttatgtcaatgctgtggactcgagatggagtgcctatggctcggattctgcc
tcctcagcacgttatgcggaacgggacaggttcatagttacagatttatctggtcacaga
aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagcaactcc
ttactccttcagagagaggcaaatgcacttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaaccttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatcctgaagactgtgcagacacaaagccagaccgagacatt
gaattggagctgtcagccctcgatacagatgaacctgatggacaaggggaacagatagaa
gagattctggacatacagctggggattagctcccaagaggatcagctgctcaatggaaca
actgtagagaatgggcatctgctaaagcagcaccagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
