KEGG   Geospiza fortis (medium ground-finch): 102035140
Entry
102035140         CDS       T03755                                 
Symbol
TAF12
Name
(RefSeq) TATA-box binding protein associated factor 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102035140 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gfr03021]
    102035140 (TAF12)
   03036 Chromosome and associated proteins [BR:gfr03036]
    102035140 (TAF12)
Transcription machinery [BR:gfr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102035140 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     102035140 (TAF12)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102035140 (TAF12)
    STAGA complex
     102035140 (TAF12)
    TFTC complex
     102035140 (TAF12)
    SAGA complex
     102035140 (TAF12)
    SLIK complex
     102035140 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 DUF5827 TAF10 DUF6965
Other DBs
NCBI-GeneID: 102035140
NCBI-ProteinID: XP_005426959
LinkDB
Position
Un
AA seq 224 aa
MLTGDILGRVWAMVSPLTGLTAVADVIKDLDTQIALIGLDPHNPKKKQDLDKLYDLKAKA
QQIMNQFGPSALINLSNFSSIKPEPASTPPQSSMANSTTVAKMPGTPSGGGRLSPESNQV
LTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQ
LHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 675 nt   +upstreamnt  +downstreamnt
atgctgactggtgacattctgggaagggtgtgggctatggtttctccactcactgggctc
acagcagttgctgatgtaattaaagatctagatactcagatagctttgattggtttggat
ccccacaaccccaagaagaagcaggacctagacaagctttatgatctaaaagctaaagcc
caacagattatgaaccagtttggcccttctgccttgatcaacctctccaacttctcctcg
atcaagccagaaccagccagcacccccccccagagctccatggccaacagcactactgtg
gcaaagatgccagggacacccagtggaggagggcggctcagtcctgaaagcaaccaggtt
ttaaccaagaagaaattgcaagacctggtgcgtgaggtggatccgaacgagcagctggat
gaagatgtggaagaaatgctgctacagatcgccgatgacttcattgagagtgtggtgaca
gccgcctgccagcttgcacggcaccgcaagtccaacactctggaagtcaaagatgtccag
ttgcaccttgagcgccagtggaacatgtggatcccgggctttggttctgaagaaatcagg
ccctacaaaaaagcctgcactacagaagctcacaaacagagaatggcactgatccgcaaa
actaccaagaaatag

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