Geospiza fortis (medium ground-finch): 102035206
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Entry
102035206 CDS
T03755
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102035206
Membrane trafficking [BR:
gfr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102035206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
TORC_M
dDENN
DUF2464
Motif
Other DBs
NCBI-GeneID:
102035206
NCBI-ProteinID:
XP_014166521
LinkDB
All DBs
Position
Un
AA seq
1025 aa
AA seq
DB search
MSSPQLFSPFEVVRYDVAAGAPERDRNGRCIRARTGETGLLIAPVTARTPFLGYAGSREL
SEQKLLRGVFTEGDEFFNTGDLVEQDREQFVRFRDRTGDTFRCRGQPGLQAQKLRLAHSR
GPFYSGSLPNVNQIGSGVPDFQGPSPLDSTRSTRHHGLVERVQRDPRRMMSPLRRYVRQI
DSSPYGPTYLSPPPEPSWRRTMPWSNFPMEKGHLFRLPSALNSGAAPPPGRRAGFLDGDS
DSKVFLFQVPPIEENFDDNKHSLKPWDTKKLSSSSARPRSCEVPGIHPSPTSVAPPAPAR
GVCPSLCPSPSFCSPCIPLPAPGEPRPGRPGAGGRAEVTVLSVFVPTGLPSPLQSSLSNP
SLQSSLSNPNLQASLRSPSLQASLSNPSLQSSHSSSSIPSSLSNQFLPSSLSSSLSNPSL
PTSPRPQPLQSSPSNPSLPSGLGGSFAATSPRRRVPLSPLSLPVAGDCRRQHPKQFSPTM
SPTLSSITQPITDVAVIIRSQGEEVPQGFTCIETSTSGHPVDLNAGLLNNPQMFLCYKRG
RDKPPLIELGVHYEGKDRPKPGYQILDTTPYSRSANLASGSPGHQRTFLTFRRAAEPPGH
HTLGVTDICLVMPSKGESTPHTFCRVDKNLNTSMWGPALFLCYKIAVAKDNTLVYEAGLL
SRYPEQDSESFPLPESVPVFCLPMGATIESWPVGTKYPLPVFSTFVLTGASGDKARSACP
HVPHHHVRVSLQMSPYDSLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQK
LLIHSLRPDVLTSVGEALVAVRFLRSRERAYQRFYGQLLRTQLFTQFIEDCSFASDREPC
LEFFDTCVDKLCQARSSAPSSPAPRRTKQEMKVAQRVAQKSSAVPELWARCLLGHCYGLW
FLYLPTQVRAAPAKLRALQLAYDVLRKMEQHKVVLPDEPPWRRERVAFAYLSPLVLRKEL
ESLVENEGAELLARPELVDKHPIIFWNLLWFFQRLALPSQLPLLLLGLSLENLWSGLNSG
GPHSR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccccagctcttctccccgttcgaggtcgttcgttacgacgtcgctgccgga
gctccggagcgggacaggaacgggcgctgcatccgcgccaggacgggtgagacggggctg
ctgatcgccccggtgaccgccaggacgccgttcctgggctacgcgggcagccgggagctc
tcggagcagaaattgctccgcggcgttttcacggaaggcgacgaattcttcaacaccggg
gacctggtggagcaggaccgggagcagttcgtgcgcttcagggaccgcaccggggacacc
ttcaggtgccggggacagcccgggctgcaggcgcagaagctgcggctggcccacagccgg
gggcccttctacagcggctccctgcccaacgtcaaccagatcggcagcggcgtgcccgac
ttccagggcccgtccccgttggattccacgcggagcacgcggcaccacgggctggtggag
cgcgtgcagcgggacccgcgccgcatgatgtcccccctgcgccgctacgtccgccagatc
gacagctctccctacggacccacgtacctgtcaccaccgcctgagcccagctggaggagg
accatgccctggagcaatttccccatggaaaaaggacacttattccggctgccctcagct
ctcaacagcggggccgcccccccccccggccgccgagctggtttcctggacggggactca
gacagcaaagtgtttcttttccaagtgcctcccatcgaagagaacttcgatgacaacaag
cactcgctgaagccctgggacaccaagaagctctcgtcctcctcggcccggccacgctcc
tgcgaggtgccgggaattcacccatctcccacctcggtggcccctcctgctcctgcccgg
ggtgtgtgtccgtccctgtgtccgtctccatcgttttgttccccctgcatccccctccct
gcccccggggagccccgcccgggccgtcccggggctgggggccgtgctgaggtaacggtg
ctctctgtttttgtccccacaggactcccctcacctctgcagagctccctgagtaacccg
tccctgcagtcctccctgagcaatcccaacctccaggcctccctgcgcagcccctccctg
caggcctccctcagcaacccctcgctccaatcctcccacagcagctcctccatcccctcc
tctctctccaaccagttcctcccttcctccctgtcctcctcgctctccaacccctcgctg
cccacgtccccccgcccgcagccgctgcagtcctcgcccagcaaccccagcctgccctcg
gggctgggcggctccttcgcggccacctcgccccgccggcgcgtcccgctcagccccctg
tccctgcccgtggccggcgactgcagacggcagcaccccaaacagttctcaccaacaatg
tcacccacattgtcctccatcacccagcccatcacggacgtggccgtgatcatccgctcg
cagggcgaggaggtgccgcagggcttcacctgcatcgagaccagcacgtccggccacccc
gtggacctcaacgcggggctgctcaacaacccccagatgttcctgtgctacaaacgcggg
cgggacaaaccccccctgatcgagctgggggtgcactatgagggcaaggaccggcccaag
ccaggctaccagatcctggacacgacgccctacagccgctcggccaacctggcctcgggc
tccccgggccaccagcgcacgttcctgacgttccggcgcgcggccgagccgcccgggcac
cacacgctgggcgtcaccgacatctgcctggtgatgcccagcaagggagagagcaccccg
cacaccttctgccgcgtggacaagaacctcaacaccagcatgtggggccccgccttgttc
ctgtgctacaagatcgccgtggccaaggacaacacgctggtctacgaggcagggctgctg
agccgctaccccgagcaggacagcgagtccttccctctgcccgagtcggtgcccgtgttc
tgcctgcccatgggggccaccatcgagagctggcccgtgggcaccaagtaccccctgccc
gtcttctccaccttcgtcctcaccggcgcctcgggggacaaggcacgctcagcatgtccc
catgtcccccaccaccacgtccgtgtgtccctgcagatgtccccgtatgacagcctgctg
ctgtgccgccccgtgtcctccccgctgcccctcagcggggccagtttcctgacgctgctg
cagaacctgggccctgacaatgctgtggcactgctggtggccgtcctcaccgagcagaag
ctgctcatccactccctgcgccccgacgtcctgaccagcgtgggtgaagccctggtggcg
gtgaggttcctgcgctcccgggagcgcgcgtaccagcgtttctacgggcagctgctgcgc
acgcagctcttcacgcagttcatcgaggactgctccttcgccagcgaccgcgagccctgc
ctcgagttcttcgacacgtgcgtcgacaagctgtgccaggccaggagcagcgccccgagc
agccccgcgccgcggcgcaccaagcaggagatgaaggtggcccagcgggtggcgcagaag
tcgtcggcagtgcccgagctgtgggcacggtgcctgctggggcactgctacggcctctgg
ttcctgtacctgcccacgcaggtgcgcgccgcccccgccaagctgcgggcgctgcagctg
gcctacgacgtgctgcgcaagatggagcagcacaaggtggtgctgcccgacgagccgccg
tggcgccgcgagcgcgtggccttcgcctacctgagcccgctggtgctgcgcaaggagctc
gagagcctggtggagaacgagggcgccgagctgctggcgcggcccgagctggtggacaag
caccccatcatcttctggaaccttctctggttcttccagcgcctggcgctgcccagccag
ctgcccctgctgctgctggggctgagcctggagaacctctggagcggattaaatagcggt
gggccccattcccggtaa
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