Geospiza fortis (medium ground-finch): 102035276
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Entry
102035276 CDS
T03755
Symbol
DDB2
Name
(RefSeq) damage specific DNA binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03420
Nucleotide excision repair
gfr04115
p53 signaling pathway
gfr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102035276 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
102035276 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102035276 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102035276 (DDB2)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102035276 (DDB2)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102035276 (DDB2)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102035276 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_HPS5
Frtz
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
102035276
NCBI-ProteinID:
XP_005419504
UniProt:
A0A6I9HEL8
LinkDB
All DBs
Position
Un
AA seq
463 aa
AA seq
DB search
MAPVNQPKDKKRERACQHWPEEAKSAGKRKRDYGERGNEKQEKKLFVRKTSKPSGKIGCS
GGGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGSIQAQLRQRLELAFLHSLSSYCLFRRA
SPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLAKTCFIKGKGPGNSLGDIKFSPY
EAEKLYVASGDGTLSLQDLEGRAVQVISRALDCGHEHHNVCCWYCSVDVSASCHAVVTGD
NVGNVVLLSTSGEEVWKLKLHKKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKTN
FLHLLPHEKPVNAAYFSPTHGAKLLSTDQHNEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVVGRYPDPKFPGYTLNELRTVDVFDGNTGDMVYQLYDPNASGIISLNK
FNPMGDTLASGMGFNILIWNQEEMAAKKHEHLLKAMTNEELEP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcgtgagagggcatgtcagcattggcca
gaagaggcaaaatcagctgggaagaggaaacgggactatggagaacgagggaatgaaaaa
caagaaaagaagttgtttgtgagaaaaacatctaaaccctcagggaaaatcggttgcagt
ggaggtgggtttgtgatgagaaacaagagagtcctttcctctcagctggagcggcgatgc
agcattgttcattatgtctaccagaaaatgctgggaggctccattcaggcacagctcagg
cagagattggagctggcttttctgcattctctttcctcatactgcctcttccgaagagca
agtccctttgacaggagagtgacatgtctggaatggcacccaacacaccccagtacgcta
gctgtcggttccaaaggtggagacatcatcctttgggactgtgaagtacttgctaaaacc
tgcttcataaaggggaaagggccaggaaattctctcggagacatcaagttcagtccttat
gaggcagagaagctttatgtggcatcaggtgatggcaccctaagtctgcaggatcttgag
ggcagagcggtgcaggtgatctctcgtgccctggactgtggccatgagcatcataatgtt
tgttgctggtactgcagtgtggacgtttctgcaagctgccatgcagtggtgacaggtgat
aatgtgggcaatgtggtcctgctcagcacttctggtgaagaggtctggaagctgaaattg
cacaagaagaaagtgactcatgtagagtttaactcccgatgtgagtggatgtttgccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaacaaac
tttcttcatctgcttccacatgagaaacctgtcaatgcagcttacttcagcccaacacat
ggtgccaagcttctgagcacagaccagcacaatgaaatcagggtttactcatcttcagac
tggaccaagccacagcatctgattccacatccacataggcagtttcagcacctcacacct
attaaggcgacgtggcatcctcgctatgacctcatagtggtaggtcgctacccagacccc
aagttccccgggtacacactgaacgagctgcgcaccgtggatgtgttcgatggaaacacc
ggcgacatggtgtatcagctctatgatccaaatgcctctgggatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctggaac
caggaggagatggcagccaagaagcatgaacatctcttgaaagccatgacaaacgaggag
cttgaaccatga
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