Geospiza fortis (medium ground-finch): 102035452
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Entry
102035452 CDS
T03755
Symbol
ABCB5
Name
(RefSeq) ATP binding cassette subfamily B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102035452 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102035452 (ABCB5)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
102035452 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
RsgA_GTPase
Rad17
AAA_28
AAA_5
G-alpha
AAA_30
AAA_29
Zeta_toxin
AAA_15
UL45
Motif
Other DBs
NCBI-GeneID:
102035452
NCBI-ProteinID:
XP_005421816
UniProt:
A0A6I9HI11
LinkDB
All DBs
Position
Un
AA seq
1316 aa
AA seq
DB search
MKDYSANSTEQNLSDPESGRKGCDDPSFQHEEHVERIDQSKPKKEMKEDEKAEKRMVGIF
ELFRYADGLDLLLMIVGLVAAAANGTGMPLLIIIFGEMTNSFVLSGVQPNDTSVNNSSSP
SDPGVDIEGDMTKFAYYYVGIGFAVLILSIIQVWTFLVTATRQTTRIRQKFFFAVLHQEM
AWFDTTQIGALNTRLTDDINTIREGIGDKISIFLQFLSTFVSGLIIGFIYGWKLTLVVMS
VSPLLAASAAIWSTLLASLTAKELSAYAKAGAVAEEILTAIKTVVAFNGQQKALEKYDAN
LEMAKRVGMKKSITTNTCLGLSQFFIFGSYALAFWYGTKLTAEDPHYDIGRVLIVFFSVI
VGAFSLGQAAPNLESMANARGAAYEVYKIINKKRLIDSSSKEGYKPDKLVGEIEFRNIHF
SYPSRPDVKILKGLNLKVQTGKTIALVGASGCGKSTTVQLLQRFYDPDQGEITLDGRDIR
TLNTKWLRENIGIVSQEPVLFATTIAENIRYGREDISDAEIEQAAKEANAFDFISRLPDK
FNTMVGERGAQLSGGQKQRIAIARALARNPKILLLDEATSALDTQSESIVQAALDKARAG
RTTIVIAHRLSTIRTADTIAGFEKGVVVEQGTHSELMLQKGVYYSLVMQQGYNSDVQDGG
TSEDSEGSGAEEYEENINPVEELSLQNHFEISVMPEKGSIRRRSSRYKSKRSSSKNPFGQ
KKKKKEVEEENLPAVPYLKILALNKPEWFYVLLGVIAAAVIGAVHPTFAVIFGKIIGAFQ
ERDPEKRSKNTVLLSLIFLLLGVIILAAYIIQGFMFGKSGETLTMRLRSLCFRALLQQEI
GWYDDQKNAVGVLLTRLATDASQVKGATGSRLALMTMTVFTLVTAIIIAFAYGWQLTLLV
LACIPFIVGANAVSASSMSGHAAEDQKALEEAGRISTESVENIRTVASLTKEEAFYERYV
ACLNHTYRKSLRKAPFYGFTYGIAQCSEYFINAAVFRFGAWLIANGLTNFENVFIVFSSV
IFAAMNVGQSSSMAPDYGKARVSAQRIFQLLDRKPLIDSYSEQGEKLSHFEGNIEFRNIH
FVYPTRPEVQVLQGLNVKVKKGQTLALVGSSGCGKSTSIQLLERFYDPVEGQVLADGFDT
KSLHLQWLRSRLGLVSQEPILFDCSIAENIQYGDNSRVVSQEEIEEAAKAANIHAFIEKL
PEKYNTRVGEKGTQLSGGQKQRIAIARALVRNPAVLLLDEATSALDTESEKIVQKALDNA
RQGRTCIVIAHRLSTVQTADIIVVIKNGRVVEQGTHSQLLAKEGHYYALVNAQVSN
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactattctgcaaattccacagaacagaacctctctgatcctgaatctggacgc
aaggggtgtgatgatccttctttccagcatgaagaacatgtagaacgaattgaccagtca
aagcccaagaaggaaatgaaggaagatgagaaggcagagaaacgaatggttggcattttt
gagttgtttcgctatgctgatgggttggatctcctgctgatgatagttggtttggttgca
gcggctgcaaatggtactggaatgccacttttgatcattatctttggagagatgacaaac
agctttgtgctaagtggcgtgcaacccaatgatacttcagtaaacaattccagctcccca
tcagatccaggtgtggatatagaaggtgacatgacaaagtttgcctactactacgtggga
attggctttgctgtgttgatcctgagcatcatccaagtgtggacatttttggttactgct
acaagacaaaccacaaggatccggcagaagttcttctttgcagtgctccatcaagagatg
gcttggtttgatactacccaaataggagcattgaacaccagactgacggatgacatcaac
accatccgtgaaggcatcggagacaagatcagtatatttctgcagtttttgtccacattt
gtgtcagggcttattataggattcatctatgggtggaagctgactctggtggttatgtca
gtcagcccacttcttgctgcatcagcagcaatttggtcaactctcctggcatcccttact
gctaaagagctgtctgcttatgccaaagcaggagctgtggcagaagaaattttgacagca
atcaagactgttgtggctttcaatggacagcaaaaggcattagagaaatatgatgctaac
ttagagatggctaaacgtgttggaatgaaaaaatccattaccactaacacatgcctaggc
ctttcacaattttttatctttggatcctatgcccttgcattttggtatgggaccaagctc
actgctgaggatccacattatgacattggccgtgtgttaattgtgttcttctctgtgatt
gtcggagctttctccctgggccaggcagctcctaacctggagagtatggccaatgcacgt
ggggctgcctatgaagtatataagattatcaataagaaacggctcatagatagcagttct
aaggaaggttacaagccagacaaactcgtaggagaaattgaattcagaaacatccatttc
agttacccttccagacctgatgttaaaatcctcaaaggtctaaacttgaaagtgcaaact
gggaagaccattgctttagttggtgccagtggctgcggaaaaagcactactgttcagttg
ctgcagagattctatgaccctgaccagggagaaattaccttagatggtcgggatattcgg
acccttaatacaaagtggctacgagaaaatattggcattgtgagccaagagcctgttttg
tttgcaaccacaatagctgagaatattcgctatggcagagaagacatttctgatgctgaa
attgagcaagcagccaaggaagccaatgcttttgactttatatctagactgcctgataaa
tttaacaccatggtgggtgaaagaggggctcagctgagtggaggacagaagcaacgaata
gctattgcccgtgccctagcaagaaatcccaagattcttcttctggatgaagctacatct
gcattagatactcagagtgaatccatagtgcaagcagctcttgataaggctcgggctgga
cgtaccaccatcgtgattgctcacagactgtctaccatcaggactgctgacactatcgcc
ggatttgagaaaggtgtcgtggttgaacaagggacacacagtgaactgatgctacagaaa
ggagtctactattcccttgtaatgcagcagggttataacagtgatgttcaggatggtggc
acatcagaagatagtgaaggctcaggagctgaggaatatgaggaaaacataaatcctgta
gaagagttgagtcttcaaaatcattttgaaatctctgtgatgccagagaaaggcagcata
cgaagaagatccagccgatacaagagcaagaggagttcatctaaaaatccctttggacaa
aagaagaaaaaaaaggaggtggaggaagaaaatctccctgctgtgccttacttaaaaatc
ttggctctgaacaaacctgagtggttctatgtactgctgggagtgattgctgctgctgtc
ataggtgcagtccaccctacatttgctgttatatttggaaaaatcattggggcttttcaa
gaaagagatccagaaaaaaggagtaaaaacactgtattgctttctttaatatttctttta
cttggagtgattatcttagcagcgtacataatccaaggattcatgtttgggaagtctggg
gaaaccctaacaatgagactgcgctctttgtgcttcagagcattacttcagcaggagatt
ggatggtatgatgaccagaaaaatgctgttggtgttctgctaactcgtcttgctacagat
gcttcccaagttaaaggcgcaactggaagccgacttgcactgatgactatgactgtcttt
acccttgtgactgccatcattattgcatttgcatacggctggcagctaactttgcttgtc
ttggcctgcattccttttattgttggtgcaaatgctgtgagtgccagctctatgtctggt
catgctgcagaagaccaaaaagctttggaagaggctggaagaatttcaacagaatccgtt
gaaaacataagaactgtagcttcactgaccaaggaagaagcattttatgaaagatatgtt
gcttgtttgaatcatacatatagaaaatctctgagaaaagctcctttctatggatttacc
tatggaatagctcaatgttcagagtactttattaatgcagcagtcttcagatttggagca
tggctcattgctaatggtctgaccaactttgaaaatgtctttatagtcttctcttctgtc
atatttgcagctatgaatgttgggcagtcttcttccatggcaccagactacggcaaagct
cgagtgtcagctcaaagaatctttcagcttttggacagaaaacctctaattgacagttac
agtgaacaaggtgaaaaattgagccattttgaaggcaacattgaattcagaaacatccat
tttgtatatccaacaaggccagaagttcaggttttgcaaggacttaatgtgaaagttaaa
aaaggacagactctggcattagtaggaagcagcggctgtggcaaaagtacatccattcag
ctcttggagagattttatgaccctgtggaaggacaagtgctagcagatggatttgatacc
aaatctctacatttacaatggctgaggtccaggctgggcctggtgtcacaggagcccatt
ttgtttgactgcagcattgctgaaaatatccaatatggagacaacagtagggtggttagt
caggaggaaattgaagaagcagctaaagcagcaaatattcatgccttcattgaaaaactg
ccagagaaatataatacacgggtgggtgagaaagggacacaactttctggaggtcaaaaa
caaagaatagcaattgcccgtgctttggttcgtaatcctgctgttctgcttctggatgaa
gctacctctgctcttgacactgaaagtgaaaagattgtccagaaagcgctggataacgcc
cggcaaggtcggacctgcatcgtcattgcccatcgcctgtccaccgtgcagacagccgac
atcatcgtggtgatcaagaacggcagggtggtcgagcagggcacccacagccagctgctg
gccaaggaaggacactactatgcccttgtaaacgcacaagtttctaattag
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