Geospiza fortis (medium ground-finch): 102035558
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Entry
102035558 CDS
T03755
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid type A receptor alpha1 subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04080
Neuroactive ligand-receptor interaction
gfr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102035558 (GABRA1)
04082 Neuroactive ligand signaling
102035558 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102035558 (GABRA1)
Ion channels [BR:
gfr04040
]
Ligand-gated channels
GABA-A
102035558 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102035558
NCBI-ProteinID:
XP_005418723
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All DBs
Position
Un
AA seq
486 aa
AA seq
DB search
MTGFFYLVPVLMWGMLMVIFLLVSESTMKRFLVLCDCLWAWSLLLNTLTERSYGQTSSQD
ELKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFF
RQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGT
LLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGS
RLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFW
LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFAT
VNYFTKRGYAWGXXXNPSPQLPQKPKKVKDPLIKKNNTYTAAATSYTPNIARDPGLATIA
KSATIEPKEVKPETKPAEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLK
VQTPHQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactggatttttttacctagtacctgttttaatgtgggggatgttaatggttattttc
cttctagtttcagagtccaccatgaagagattcctggtgctttgtgactgcctctgggcc
tggagcctcctcctgaatacgctgactgaaagaagctatggacaaacctcatcacaagat
gaacttaaagacaacaccacagtgttcaccagaatattggatcgccttctggatggctac
gacaaccgcctgagaccggggctgggagagcgtgtaactgaagtgaagactgacatcttc
gtcaccagttttgggcctgtttcagaccatgatatggaatacactatagatgtatttttc
cgccaaagctggaaagatgagagattaaaattcaaaggacctatgactgttctccgatta
aataatttaatggccagcaaaatttggactcctgatacctttttccacaatggaaagaag
tcagtggctcataacatgacaatgccaaataaactattacgaatcacagaggatgggacg
ttgctatacacaatgagattgactgtgagagcagaatgtcccatgcatttagaagacttt
cctatggatgcacatgcttgccccttgaaatttggaagctatgcttataccagagcagag
gttgtgtatgagtggacacgggagccagcgaggtcagtggttgtggctgaagatggctct
cgactgaaccagtacgatctgctgggacaaactgtggactctggcattgtgcagtccagc
acaggggaatatgttgttatgactacacattttcatttgaagaggaagatcggttacttt
gtcatccagacttatctgccatgcatcatgacagtgatactgtcacaggtgtccttctgg
cttaacagagaatctgttccagcaagaactgtatttggagtgacaactgtgctgaccatg
accaccctgagcatcagtgccaggaactccctgcccaaggtggcctatgccacggccatg
gactggttcatcgccgtctgctacgccttcgtcttctcggcgctcatcgagttcgccacc
gtcaactacttcaccaagaggggctacgcctggggnnnnnnnnnnaacccctccccacag
ctgccccaaaagccaaagaaggtgaaggatcctctcatcaagaaaaacaacacatacact
gctgcagctacgagctacacccctaatattgcaagggaccctgggctggcaaccattgct
aaaagtgcaacaattgagcccaaagaagtgaagccagaaacaaaacctgcagagcccaag
aaaacttttaacagcgtcagtaaaattgatcggctatcgagaatagccttccctctgctt
tttggaatctttaatttagtctactgggccacctatttaaacagggagccccagctaaag
gttcaaactccacatcaataa
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