Geospiza fortis (medium ground-finch): 102035561
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Entry
102035561 CDS
T03755
Symbol
TBC1D8
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102035561 (TBC1D8)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102035561 (TBC1D8)
Endosome - Golgi transport
Rab GTPases and associated proteins
102035561 (TBC1D8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
102035561
NCBI-ProteinID:
XP_005420108
LinkDB
All DBs
Position
Un
AA seq
1137 aa
AA seq
DB search
MGKKEETRTTYSMNIFLSHXQSVWCAQTCHLQCRGRLVGALDAVLDSNARVAPFRILLQV
PGSQVYSAIACGATAEEINQHWEWLEQNLLHTLSVFDNKEDIVSFVKGKVKALIAEETSS
KLAEQEEDPEKFREALVKFESRFNFPEAEKLITYYSCCCWKGKVPRQGWLYLSINHLCFY
SFFLGKELKLIIPWVEVQKLERTSNVFMTDTVRVTTANKERDFSTFLNISEAFRIMEQLA
DVTLRRLLDNEIFELDPGLQDPTQITKRDLEARAQNEFFRAFFRLPRKEKLHEVVDCSLW
TPFSRCHTAGTMYTSDSYICFASKENGCCTVIIPLREVISIEKMEDTSLLPNPIIVSIRS
KTAFQFIELKDRDTLVENLLQRFKEVNSSNTLHCNNLQNNNQNSLAFGSMCTLGDDEPAC
LGTEASHGKERSECEKENNYLLNAEALRSDFHQSGMPGLDFGKSREQIKESLWDDHFAEY
GRTVCMFRTEKIRKLVAMGIPESLRGKLWLLFSDAQTDLASHPGYYIHLVEASMGRCCMA
REEIERDLHRSLPEHPAFQSETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYAKE
EEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKEQLPELAEHMKDLTALASISLS
WFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAILEANAVDLCNSKDDGQALMILSR
FLEHVKNEESPLPPIGNHHAFFSDDQEPSPVTEIANLIHDSYEKFGDHSVEQIEHMRYKH
RIRVLQSHEDTTKQNVLRVVIPDVSILPEDLEELYDLFKREHLLRCYWAGGSAVPERHDP
SRPYAEQYRIDAQQFAGLYRLLSPWTCGEHTELLAHRTFRLLDDNMDQLIEFKALASCLD
VMYNGEMNEKIKLLYKLHIPPALTENERDSQSPLKNPLLSTSRPLVIGKSNGDAVDYQKQ
LKQMLKDLAKEKDTKTEKELPKMSQKEFIQFCKTLYSMFHEDPEENDLYQAIATVTTLLL
QIGEVGQRSLSLGSGSDEFTEDLQPEASASEQDAVFTDTVKSPHKDSQPSPMTEGDWTVS
FEHILASLLTEQSLVNFFEKPLELKPKLENAKLNQYSLRTNGMSCQSRSEHAKPSMQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaagaagagacaagaactacctacagcatgaacatcttcctgtcacattga
caaagtgtatggtgtgcacaaacatgccacctgcagtgcagaggtcgcttggttggtgcc
ctcgatgccgtgttagactctaatgcccgcgttgctccatttcgaattttactccaagtt
ccaggctctcaggtttactctgccattgcatgtggtgccacggcagaggaaataaaccag
cactgggaatggctggaacaaaacttgctccatactttgtctgtgtttgacaataaagag
gatattgttagttttgtcaaagggaaagtcaaggcactgattgcagaggaaacaagcagc
aaactcgctgagcaggaggaggaccccgagaagttccgagaagccctggtgaaatttgaa
tccagatttaattttcctgaagcagagaagttgatcacctattattcctgttgctgttgg
aaaggaaaagttcctcggcaaggctggctttatttgagcatcaatcatctctgtttttat
tccttcttcctgggcaaagaattgaaacttatcattccttgggttgaggtccagaagctg
gaaagaacctccaatgtcttcatgacggacacagtccgtgtcaccacagcaaacaaggag
cgcgacttctccaccttcctcaatatctctgaggctttcaggatcatggagcagctggcc
gatgtgacactccgaaggctactcgataatgaaatctttgaactggatccaggcctgcag
gatcctactcagattaccaagagggatcttgaagccagagcacagaatgaattctttcgg
gccttcttcagattgcccaggaaggagaagctgcacgaagttgtggactgctctctctgg
acgcccttcagtcgctgtcacacagcggggacaatgtatacttcagacagttacatctgt
tttgccagtaaagaaaatggctgttgcactgttatcatcccacttagagaggtaatcagt
atagagaagatggaggacacaagccttctccctaatcccatcattgttagcataaggagt
aagacagcctttcagttcattgagctgaaggacagagatactttggtggagaacctgctc
cagaggttcaaagaggtgaactccagcaacacattgcactgcaacaacttgcaaaataac
aatcagaacagccttgcctttggatccatgtgcacgctgggggatgatgagcctgcgtgt
ctgggaacagaggcttcacatgggaaagagagaagtgaatgtgaaaaggagaacaattac
ttgctcaatgcagaagcactaaggtcagactttcatcagtcaggaatgccaggccttgat
tttggaaagtctagggagcaaatcaaagagagcctgtgggatgaccattttgcagagtat
ggcagaaccgtgtgcatgtttcgcaccgagaaaatcagaaaacttgttgctatgggaatt
cctgaatccttaagaggcaaactctggctgcttttctcagacgcgcagacggatctcgcc
tcgcaccctggctactacatacacctggtggaggcctccatgggcaggtgctgcatggca
agggaggagatcgagcgtgacctgcaccgctcgctgcccgagcacccggccttccagagc
gagaccgggatagccgccctccggagggtgctcaccgcctacgcacacaggaaccccaaa
ataggatactgccagtctatgaatattttgacctccgtgttgctgctgtatgccaaagag
gaagaagccttttggctgctggttgctgtgtgtgagcggatgctgccggattacttcaac
caccgagtgataggtgctcaggtagaccagtcagtgtttgaagagcttataaaagagcaa
cttccagagctggctgaacatatgaaggatctgacagccctagcttccatctctctttcc
tggttccttacccttttcctcagcatcatgcccctggaaagtgctgtgaatgttgtggac
tgcttcttctatgatggcatcaaagccattttccagctgggcttggccatactggaagcc
aacgctgtggatctgtgtaacagcaaggacgatgggcaggccctgatgatcctgagcagg
tttttagagcatgtcaaaaacgaggaaagccctctgccacctattggtaatcaccatgca
ttcttcagtgacgaccaggaaccctctccagtgactgaaatagcaaacctgattcatgac
tcctatgagaaatttggagatcactctgtggagcagatagagcacatgcgctacaaacac
cggatccgtgtcctgcagagccacgaagatacaaccaagcagaacgtgctcagagttgtc
atcccagacgtttcaattcttcctgaagatttagaggaattgtatgacttgtttaagagg
gaacacttgctcaggtgctactgggctggcgggagcgcggtgccggagcgccatgacccc
agccggccgtacgccgagcagtaccgcatcgacgcccagcagttcgccggcctgtaccgc
ctgctctcgccctggacctgcggggagcacaccgagctgctggcccacaggaccttccgc
ctgctggacgacaacatggaccagctcatcgagttcaaggcgctcgccagctgcttggat
gttatgtataatggagaaatgaatgaaaagataaagttactttataagctgcatatccca
ccagctctcacagaaaatgaacgagacagccagtcaccattaaagaatcctttgctgtca
acatcaagaccactagtcattggaaaatcaaacggtgatgcagtagattaccaaaagcaa
ttgaagcagatgctgaaggatctggccaaagaaaaggatactaaaactgaaaaagaattg
ccaaaaatgagccagaaggagttcattcagttctgcaaaacgttgtatagcatgtttcat
gaagatccagaggagaacgatttgtatcaagccattgccactgtgaccacactgttactt
cagattggagaagtaggacagaggagcctcagcctggggagtggctcagatgagttcacc
gaggacttgcagcccgaggcctctgcttcagagcaggatgctgtttttactgacactgtg
aagagccctcacaaagactctcaaccttcacctatgactgaaggggactggactgtctct
tttgaacatattttagcctccctcttgactgaacaatcattagttaacttctttgaaaaa
cccttagaactgaaaccaaagcttgagaatgcaaagctaaatcaatacagtctcagaaca
aatggaatgagctgccagtcacggagtgaacatgcaaaaccaagcatgcagtag
DBGET
integrated database retrieval system
