Geospiza fortis (medium ground-finch): 102035764
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Entry
102035764 CDS
T03755
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102035764 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102035764 (IRF6)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102035764 (IRF6)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102035764 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102035764
NCBI-ProteinID:
XP_014166150
UniProt:
A0A6I9Z902
LinkDB
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Position
Un
AA seq
451 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGMYPGLIWLXXXXATRHSPQHEEENTIFKAWAVETGKYQE
GVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQGSIINPGST
GSAPWDEKDNDLDDEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCSPETVWPKNE
PLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNPQGCRLFYGE
LGPMPDQEELFGPISLEQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEVSGHAIYAVR
LCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQPPYEIYFCF
GEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAH
LKQLYRLLQNHQEGWPMQAPAMHMAQPLPAQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccctccacccgcgcagggtgcgcctgaagccgtggctggtggcccaggtggacagt
gggatgtaccccgggctgatctggctgnnnnnnnnnnnngcgacccggcacagcccccag
cacgaggaggagaacaccatcttcaaggcatgggccgtggaaacgggaaagtaccaggaa
ggagtggacgagccagaccctgcaaagtggaaagcccagctccgatgtgcacttaacaag
agccgggagtttaatttgatgtacgatggcaccaaggaggtgcccatgaacccaattaaa
atctacgaagtgtgcgacatcccgcagtcgcagggatcaatcattaatccaggttccact
ggctcagctccatgggatgaaaaggataatgatcttgatgatgaagaggaggaagaattg
aatcaatctcagcatgtcccaattcaagagacgtttccatttcttaatatcaatgattct
ccgatggctccagccagtgcagaaaactgcagccctgaaactgtgtggccaaagaatgaa
cctctggatatggaaatgcccccaacggcgctgcagcatgacttcttcagcagccccgag
ctgtggatcagctccctgccaatgacagacctagaaatcaagtttgaatatcgaggaaag
gagaccggacccacaacgaccgtgagcaacccgcagggctgcagacttttctatggggag
ctgggtcctatgccagaccaggaggagctctttgggcccatcagcttggagcaagtcaag
ttcccagggacggagcagatcaccaatgagaggcagaagatcttcacgagccggctgctg
gatgttatggacaggggactgatcctggaggtcagcggccacgccatctacgccgtgcgc
ctctgccagtgcaaggtgtactggtctgggccctgtgccccctcctccaccaccccaaac
ctcatcgagaggcaaaagaaggtcaagctcttctgtctggaaaccttcctaagcgagctg
attgcccatcagaagggacaaattgagaaacagccaccatacgagatctacttctgcttt
ggagaagagtggcctgatggaaaacccagggagaggaagctgatcgtggtgcaggtcatc
cccgttgtggcgcggatgatctacgagatgttctccggggacttcacgcgctccttcgac
agcggcagcgtgcggctgcagatctccacgcccgacatcaaggacaacatcgtggcacac
ctgaagcagctctaccgcctgctgcagaaccaccaggagggctggcccatgcaggcccca
gccatgcacatggcgcagccgctcccagcacagtga
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