Geospiza fortis (medium ground-finch): 102035953
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Entry
102035953 CDS
T03755
Symbol
SORCS1
Name
(RefSeq) sortilin related VPS10 domain containing receptor 1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102035953 (SORCS1)
Membrane trafficking [BR:
gfr04131
]
Protein recycling
Others
Others
102035953 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
102035953
NCBI-ProteinID:
XP_005417378
LinkDB
All DBs
Position
Un
AA seq
1156 aa
AA seq
DB search
MEKVAGWYPAWHVALLYWTWLFLFTYGFTGAEITCRSCRSKVQPQQQPQQGLLMHLRTDR
GEKEQRRFLGEKGGERGQEAGSEDAGLQATLAPAPAGMQFSGWETRRVILILTKLYDYNL
GSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISS
DEGATYQKYRLNFYIHSLLFHPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVTPNRFY
WSMMGNGREPDLVHLEARTVDGHAQYITCKMQNCSEATRSKPFPGYIDHNSLIVQGDYVF
VQLTSGGRPHYYVSYRRSPFAQMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLY
ISDTRGVYFTLALENVKSSQGLEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGR
DWSLLQAPHTDLRGNPIHCLLPYCSLHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGT
ELSDNDISMFVTSDAGNTWRQIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRS
WSKYSFTSLPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCEEEDYR
PWQLHSQGEACIMGAKRIYRKRKSEKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSN
GQCLPAFWYNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKPPQG
LRIITADGRLTAQQGHNVTFLVQLEEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIY
QNVGIFRVTVLVENSLGSDSAVLYLHVTCPLEHVHLSLPFVTTKNKEINATAVLWPSQVG
TLTYVWWFGNNTEPLITLEGSITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEKFQSL
RLSFSPNLDDYNPDIPEWRRDISRVVKRALVEATGISSKHVLVAVLPGLPTSAELFILPY
QDATGEKKRTAANLEQLSETLIQKLNQNLVHFELKPGVRILVHAAHLTAAPLVDLTPSHS
GSAMLMLLSVVFVGLAVFIIYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQS
ELMSPEQLVDEKLEVHPIEQPQATVQNPRKGNATKVVWTEDFQKACGSPRDFKPRPRAEV
FPQLLTPRAQKKSLPM
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttatggctttaccggtgcagaaataacttgcagatcctgccgttcc
aaggtgcagccgcagcagcagccgcagcagggattactgatgcacttgaggaccgacaga
ggagaaaaggagcaaaggaggttcctcggggagaagggaggtgagagagggcaagaggcc
ggctcggaggatgccgggctgcaggcgaccctcgcccctgctcccgcggggatgcagttc
agcggctgggagacacggcgagtgatactaattctgacaaagctgtatgactacaacctg
ggaagcatcacagagagctctctttggaggtcaacagattatgggacaacatatgagaaa
ctgaatgataaagttggtctgaagactattttgagctacttgtatgtttgcccaacaaac
aaacgtaagattatgctgctgactgatccagaagttgaaagcagcttattaatcagttct
gatgaaggagccacctatcaaaaataccgtctgaacttctacatccacagtctgctcttc
caccccaaacaggaggattggatcttagcctacagccaagatcagaagttattcagttct
gtggagtttggcagaagatggctgcttcttcatgagggagttacacccaacaggttctac
tggtctatgatggggaatggaagagagcctgaccttgtgcacctggaggcaaggacagtg
gatggccatgcccaatacatcacctgcaagatgcagaactgcagtgaagccactcgcagc
aaaccctttccaggctacattgaccataactccctgatcgtccagggtgattatgtcttt
gtccagctgacatcaggaggaagaccacattattacgtttcttataggaggagcccattt
gcacagatgaagctgccaaagtactccctgcccaaggacatgcatgttatcagcacagat
gagaatcaggtgtttgcagctgttcaagagtggaaccagaatgacacctataacctgtac
atctcggacacccgaggggtctacttcaccctggccttggaaaatgtcaagagtagtcaa
gggctggaggggaatgtgatgattgacctctatgaggtagcagggataaagggaatgttc
ttggctaacaagaagattgacaaccaagtgaaaactttcatcacctacaataaagggaga
gactggagtttgttgcaggctccgcacacggatctgaggggaaatcccattcactgtctc
ctaccctattgctcccttcatcttcacttgaaggtctcagacaacccctatacctcagga
aacatcgccagccgagacactgcccccagtattattgtagcttcaggtaatataggcact
gagctatcagacaatgacatcagcatgtttgttacttctgatgctgggaacacttggagg
cagatctttgaggaagagcacagtgttctgtacctggatcaaggtggagtacttgttgcc
atgaaacacacatctctgcctatcagacacctctggttaagttttgatgaagggagatct
tggagcaagtacagtttcacatccctcccactgtttgtagatggagttttaggggagcct
ggagaggaaaccctcatcatgacggtgtttggacacttcagccaccgctcagagtggcag
ctggtgaaggtagactacaagtccatctttgatcggagatgtgaggaagaggactacagg
ccttggcaactccacagccagggagaagcctgcatcatgggagcaaaaaggatctacagg
aagcgcaagtcagagaagaagtgcatgcaagggaaatatgctggggccatgacctcggag
ccctgcgtgtgcacagaggcagactttgactgtgattatggatatgaacgccacagcaat
gggcagtgtttaccagcattttggtataacccatcctccctgtcaaaagactgcagcctt
ggacagagttacctcaacagcactgggtacaggaaggttgtttccaacaactgcacggac
ggggtgcgggagcgctacacggccaagccccagcagtgcccgggcaaacctccgcagggg
ctgcgcatcatcacggccgacgggcgcctcacggcccagcagggccacaacgtcaccttc
ctggtgcagctggaggagggagacctccagagatcccttatccaggtggattttggagat
ggcatcgctgtgtcatatgccaacctcagctctacagaggatgggatcaagcacatctac
cagaacgtgggcatattccgggtgaccgtgctggtggaaaacagcctgggctctgacagc
gctgttctctacctgcacgtaacatgccccttggaacacgttcacttatctctgcccttt
gtcaccacgaagaacaaggagatcaacgccacagcagtgctgtggccaagccaagtggga
acgctcacttatgtctggtggtttgggaacaacacagagccactgatcacattggaaggg
agcatcacattcacattttctgtggaagggatgaacaccatcactgttcaggtctcagca
ggaaacaccattcttcaggacacaaagactattgcagtgtatgagaaatttcagtccctg
aggttatcgttctctccaaaccttgatgactacaacccagatatcccagagtggagaagg
gacatcagcagagtagtcaagagagctctggtggaggctacaggcatttccagcaagcac
gttctggttgcagtgctccctggcctgcccacatctgctgaactcttcattttaccatat
caagatgccacaggagaaaaaaaaagaacagcagcaaacctagagcagctttcagaaaca
ctgatccagaaactgaaccaaaacctggtccattttgagttgaagccaggagttcgaatc
cttgtccatgctgcccatttaacagcagctcccctggtggacctcactcccagtcacagt
ggttcagccatgctgatgctcctctctgttgtttttgtgggactagctgtgttcatcatc
tacaagttcaaaaggaagattcctggccttaatatatatgcacagatgcagaatgaaaaa
gatcaagagatggtcagtccagtcagtcagagggaaagcatacctaatgtccctcaaagt
gagctgatgagccctgagcaactagtagatgagaagttggaagtccaccccatagagcaa
cctcaggccacagtccagaacccaaggaaaggaaatgcaaccaaggtagtctggacagag
gacttccaaaaagcttgtggatcaccaagagatttcaagccaagacccagagcggaagta
tttccacagctgctgacccccagagcacaaaagaaatccctacctatgtaa
DBGET
integrated database retrieval system
