Geospiza fortis (medium ground-finch): 102036023
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Entry
102036023 CDS
T03755
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH-type containing 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102036023 (ZC3H13)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
102036023 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
102036023
NCBI-ProteinID:
XP_014162379
LinkDB
All DBs
Position
Un
AA seq
1629 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKDKKAST
VSSPLLEQQRSSKSTQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKARDVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRKQTSRAPA
KSTTHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSPPQRKRSPSRHRSPARDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRIGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWESRSS
YTDRDRYDSRDQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRD
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKEKGREDRRDKREDIRDERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEERKSDRKESSRRYEEP
EFKERVSSADKQREQPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKIQKKATK
KKKDDDSGVERYTNEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEAPTKREDTTFSDWSDEDVPERGDIVVPERTTEDSHR
KSHRTRVEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TARKRILHSSSRDRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRR
SSPESDRQVHSRSGSFDSRERLQERDRHDHDRERERDRREGRQRDWDRDVDKDWPRSRER
ERLRERERDREKRRGTLDISSQKESTKHSETKLDRDHEKEFDGACRDSAASEKEKTDKDL
GPSQGFEDGNEAEKVESLEGGEDEAKTNDVQSLGSGAGEYEPISDDELDEILAGDAEKRE
DQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLKFTPGAVMLRVGISKRLAGP
ELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALRRKEERAGLLSNLGPCCKALCFRR
DSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRKTVCQVPGQEKTEDSKIAQP
ALQQEVCVT
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatctgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcctcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagtgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggttagatctaaattgtcaccatcaccatcaccacgaaagtccagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagcaagtaagaaagacaagaaagcatctact
gtctcttcaccacttttggagcagcagaggagttctaaaagtactcagagtaaaaagaaa
ggtcctcgtacccctagccctcctcctccagtacaagaggaaactcccctggggaaaaaa
cacaaggaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggacgtaaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccgtctgaa
agctcccgtagacagaaacgttctcctagtcctgcagatcactctggcagtaattcttcc
ccttccagggagtactctccacctgctgcaaggcgaaagcaaacctcccgagctccagcc
aagtcaaccactcacaaacataacttctcaccctcgcgcaggtctgcttctccatcaggt
cagcatcattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaaggactccttctccatcctatcaaagg
acagcctccccgcctgcaaggcggtcatcttccccctatcccccacactcttcctctcca
cctcagaggaagcgaagcccttcgagacaccgctctcctgccagagacaagggaaggcac
gatcgcgatcggacttcacagtctcatgacaggcgccacgaaagacgggatgaaacaaga
gggaaaagagaaaaagaaagagaaacaagagatgatcgtgactatgaccaagagcagagt
acctccagggaccatagggatgacagagagtctcgtgatggaagagatcggagggacacg
agagacaccagagatcggcgggagccacgggaatccagagacactcgagactccagagac
acgcgggattatagcagggacaccaaggacagtcgtgaccagagagactcacgctccaca
cgagactcccatgactacagggacagagagagtcgagatgctcataaaaaggatgaccag
tatcaggatgacttgcgtagctatggaagatcccatggcagagaggagagctctcgtgct
gaaacaaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaattggc
agaagtcgaggccgaggaccagagttatctgacaaaggaagtcggggtactagaggatcc
caggctgatggtcacagcagtagtgggaactaccacgacagctgggaatcgaggagtagc
tacactgatcgggatcgctatgacagtcgggatcaagcaagggactcctcctttgagcga
agacacggtgaacgggataggcgagacaacagagaaagagatcagagagcaagctcacca
gtacgacaccaaggacggagtgatgatcttgagcgggatgagaggagagaggagcgaagg
gtggatcggtctgacgacaggagagatgaaagggctcgggagagagagcgggaaagggag
agggaccgagagagagaaagagaaagagaccgggaaagagagagggagaaagaaagagag
ctggaacgagatcgtgctcgggagcgggagagggacagagagcgggacaaagacagggac
cgtgagcgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagcgggaggaacgagaaagggagcgagaacgagagagagatcga
gagcgggagcgcgaaagggagagaggtagagacagagacaaagaaagagaccgccagaga
gactgggatgacaaagaaaaaggaagggaagaccgcagggataagagagaagatattcga
gacgaaagaggctcaagagatgtccacgaggaaagaaaatccaagaagcgccatagaaat
gaaagcagtccaagtccccgtcaatcacccaaacgtcgccgtgatcattctcctgatagt
gatgcctacaacagtggagatgataaaaatgaaaagcacagactcctgagccaggttgtg
cggccgcaggaatcccggtcgctgagcccctctcatgtcacggaggagcggcagagtcgc
tggaaagaagaagagcgaaaatcggacagaaaggaaagttcccgacgctatgaagaacca
gagtttaaagagagggtttcttcagcagataagcaaagagagcagccagatgcttcagaa
ggttcccggtccagggttcaggaaaatcttggacaccgcccttctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaagaaatctaagatacagaaaaaggccacgaag
aagaagaaagatgatgacagtggggtggaaaggtacactaatgaaccagcaactgaggag
agccaagtcttttcccctaagaaaggtcagaaaaggaaaaatgtggagaaaaagcggaag
agatccaagggtgattctgaagtttctgatgaagagattgttccacatcataaaaagaaa
aaaggcccaagaacccctcctgtaactaaagaagaattggttgaagcaccacctgagaaa
gcagtggcagaagcccccacaaaaagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagaaccactgaggattctcataga
aaaagtcacaggacgagggtagaaaaggtggaagcccctcatgttactatagaggatgga
ccacaccgtaagcctgtagaccagaagcgcagcagcagcctcggcagcaatcggagccat
gcctccagcaggctcagatccccctccaatgagtcagcgcatcgcagtggagatgatcag
actgcacggaagaggatcctgcacagtagctctagggaccgggatagggacagggacagg
gagaagaaaagcttagaaatcactgaaaggaagtcccgaattgatcagctgaaacgaggg
gaacccagtcgcagcacatcttcagatcgtcaagattcaagaagccacagctcaagaaga
agttcccctgagtcagatcgtcaggttcattccagatccgggtcctttgatagcagggaa
aggcttcaggagcgagatcgacatgaccacgatcgagaacgagagagagacaggagagag
gggagacagagggactgggaccgagatgtggacaaggactggccaaggagccgggagcga
gaaaggctcagggagcgagagagggatagggagaaaagacggggaactcttgacatctcc
tctcaaaaggaatcaacaaagcacagtgaaacaaaactggacagagatcacgaaaaggag
tttgatggtgcttgccgggactcagcagcttcagagaaggagaaaacagacaaagattta
ggaccttcacaaggctttgaagatggaaatgaggctgaaaaggtagagagtctagaagga
ggagaggatgaagcaaagactaatgatgtgcagtcactcgggtctggtgctggagaatat
gagcctatcagtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgtgag
gatcaacaggaggatgagaagatgcctggtaaaaatccagtggatgttatagatgtagac
tggtccagtcttatgccaaagcagccaaaagagccacgtgagcctggagctgcgctctta
aaattcacaccaggtgctgttatgttgagagttggcatttccaagcgattggcaggacct
gagctcttcaccaaaataaaagagacgtgccagagagtgttagaaaaacctaaagatgca
gaaaacctttttgagcacgaactgggagcactgaacatggctgcacttcggcggaaagaa
gagagagcaggtcttctcagcaatctgggtccttgctgcaaagcactctgcttccgcagg
gattctgcaattcggaagcagctcatgaagaatgaaaagggtgcaacaaaacaaacttac
acaaattctgcagcaatggacagcgacttgttacggttgagtctacggttattcaaacga
aagactgtgtgccaggttcccgggcaggaaaagacagaggacagcaaaattgcacagcca
gctctccagcaggaagtgtgtgtgacttga
DBGET
integrated database retrieval system
