Geospiza fortis (medium ground-finch): 102036086
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Entry
102036086 CDS
T03755
Symbol
USP4
Name
(RefSeq) ubiquitin specific peptidase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102036086 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102036086 (USP4)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102036086 (USP4)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102036086 (USP4)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102036086 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
UCH_1
DUSP
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
102036086
NCBI-ProteinID:
XP_005422591
UniProt:
A0A6I9HJ28
LinkDB
All DBs
Position
Un
AA seq
868 aa
AA seq
DB search
MELRNPQTQSLKEHLIDELDYVLVPTEAWNKLVAWYGCIDGQQPIVRKVVEYGLFVKHYK
VEVYLLELKLCESSDPDNVISCHFSKADTVATIEKEMRKLFNIPAEKETRLWNRYMSNTY
EQLSKLDSTVQDAGLYQGQVVLIEVKNEDGTWPGQHCLAKSSTATSRNFTTSSKSSASSY
SSVSATSVITNGDSSNSYGLNSSSLGRGGSGFVCNSYNCRDSASLSQPGLCGLSNLGNTC
FMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQMWSGRHSHVA
PRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEV
AKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRLMEV
TLVYADPQRRPVQYRVVVPMMGAISDLCESLSKLSGVPAENMVVTDVYNHRFHKIFQMDE
GLNHIMPKDDIFVYEVCKPSEDGSEYVTLSIYFREKTVRQSSNTSGTVLFGQPLLISVPK
HKLTVDHLYSVVLEQISRCVKLPLAEEYSPPCPDRGTCNGSNGVVEGDIEEMEHQDGGEE
GKEKLTEADPCHSEGCMQVESARDLQPCKKQHFTLSLVNSSGTSEINSIVEGKILKLNAF
SAVAIDWDSETRRLLYDEQEAQAFEKHGSMLQLQKKKAVVALRDCIELFTTMETLGEHDP
WYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVC
DPRAGSYVYDLIAVSNHYGAMGVGHYTAYAKNKVNDKWYYFDDSSVSVASEDQIVTKAAY
VLFYERRNSEEHSAPSAPQEECDGMDTN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagaaatccacaaactcagagtttgaaagaacacctcattgatgagctggat
tatgtgctggtgcccaccgaagcctggaacaaactagtagcgtggtacggctgtatagac
ggacagcagcctattgtgaggaaggtggtggagtatgggctgtttgtgaagcactataag
gtcgaggtttatctcctggagctgaagctgtgcgagagcagcgatcccgacaatgtcatc
agctgccacttcagcaaggcagatactgttgctaccatcgagaaagaaatgagaaaacta
ttcaatatcccagctgagaaggaaaccaggctatggaacagatatatgagtaacacttat
gagcagctcagcaagctggatagcacagtgcaagatgcagggctctatcagggtcaggtt
gttttaatagaagtgaaaaatgaagatggcacgtggcctggacagcattgcctggcaaaa
tcaagcactgcaactagcagaaactttactacctcttcaaaatcatcagcaagttcttat
tcctcagtgtctgccacttctgtcattactaacggtgatagcagtaactcctatggactg
aacagctccagcctgggcaggggaggttctgggtttgtctgtaactcttacaactgcagg
gacagtgcttccctctcacaacctggactctgtggactcagtaaccttggaaacacctgc
ttcatgaattctgcattacagtgcctgagcaatactcctcctctgactgactacttcctg
gaagataaatacgaagctgaaataaatcagaacaacccactggggatgaggggagaaatc
gcagaagcctatgcagatctcattaaacagatgtggtctgggaggcattctcacgtggcc
cctcggatgttcaaaacacaggttgggcgatttgctcctcagttctcaggataccagcag
caggattcccaggagctcttggcttttctgctggatggcttgcatgaggatttgaacaga
gtgaagaagaagccctacttggagctgaaggatgccaatggcagacctgattcggaggtg
gcaaaagaggcatgggagaaccataggctgaggaatgattccatcattgtggatattttt
catggtcttttcaagtctacccttgtttgtcccaaatgctctaaagtttctgtgaccttt
gatcccttctgttacttaactctcccactgcccttgaggagggaccggcttatggaagtt
accctggtgtatgcagacccacagcgcagacctgtccagtaccgggttgtggtgccaatg
atgggggccatctcggatctgtgtgaatcactttccaaactctctggtgttcctgcagaa
aatatggtggtgacagacgtgtataatcacagattccacaaaatcttccaaatggatgaa
ggtttaaatcatatcatgccaaaagacgacatcttcgtgtatgaagtttgcaagccgagc
gaggatggctcagagtatgttactctctccatttactttcgggagaagacagtgaggcaa
tccagcaacacttcagggactgtgctctttgggcagccgctgttaatatctgtgcccaag
cacaagctcactgtggatcacctgtacagtgtggttttggagcagatcagccgctgtgtg
aaactccctctggcagaagaatactccccaccctgcccagacagaggaacctgcaatggc
tccaatggtgtggttgaaggtgacattgaagagatggagcatcaggatggtggagaggaa
ggcaaggaaaagctgacagaagctgacccctgccactcagagggttgtatgcaagtggag
tcagcaagagaccttcagccttgcaagaaacagcatttcactttaagccttgtaaattcc
tctgggacctcggagataaactccattgttgaaggaaaaatcttaaaactgaatgctttt
tctgcagttgctattgactgggattctgagacacggaggctgctgtatgatgaacaggag
gcacaggcatttgaaaaacatggaagcatgctacagctacagaagaagaaggctgttgta
gccctcagagactgcatagagctcttcactactatggaaacacttggtgaacatgacccg
tggtactgccctaactgtaagaaacatcagcaggccacgaagaagtttgacttatggtct
ttgcccaggattttggtggtacatttaaaacgcttctcgtacagcagatactggagggat
aaacttgacacggttgtggaattccccatcaggggtttgaacatgtctgagtttgtctgt
gacccaagagcaggctcatatgtgtatgacctcattgcagtatccaatcactatggagcc
atgggagtgggccactacactgcctacgccaagaacaaggtgaatgacaagtggtactac
ttcgacgacagcagcgtctcggtggcttcagaagaccaaatagtgacaaaagctgcgtat
gtgctgttctatgagcgccgaaacagtgaggaacattctgccccttctgctccccaggaa
gagtgtgatggcatggacaccaactaa
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