Geospiza fortis (medium ground-finch): 102036161
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Entry
102036161 CDS
T03755
Symbol
DMXL1
Name
(RefSeq) Dmx like 1
KO
K24155
rabconnectin-3a
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102036161 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102036161 (DMXL1)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102036161 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
102036161 (DMXL1)
RAVE complex
102036161 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
102036161
NCBI-ProteinID:
XP_005429895
LinkDB
All DBs
Position
Un
AA seq
2955 aa
AA seq
DB search
MQQGKIAASYGKVICIFEPVSILKQNKNAVLHYQWQKNAQISLEAIVHNLTWDPPGTRLL
TGSNCLQLWSNVPLENPTDNDSTERAGVGLGEWRCIWQCKTASQVCLMKFSPDGEFFATA
GKDDCLVKVWYNAESWRSAVSPPGASPENRTKELDFSFVYLAHPRSVNAFSWRKTSKFMP
RGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYRGGYSNWSEAVNFTNNFKRNTSSKEKVH
SALELNLRHFRRGRRRSGAVVAHTGYALHQQDPHEAHRNIPPHANALCHYHIAASINPAT
DIPLLPSITSLSLGENEEKSGPFIVHWLNNKELHFTLSMEVFLQQLKRSFEHHSPETNTE
DSNQMDGRSEEEADENSDEQKGNQEKKELGDEKAAPYSSLVPLSSAIFDHEIEVLLSEWS
KNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCRSIV
MYACTKNVDLAIQQGKQKPSGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMMISKHADGS
LNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALISPDVE
KAIQTNESSKSQESPVRPQSRGNANVASQDPNAVYSELILWRVDPVGPLSFSGGVSELAR
INSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDAKKLLCELS
NPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFILNTQEKEIP
SKKSSLSDSGNQQNGFSEKFYLIVIEYTQNHSLLHMWHLHLKAIPVSIDEKIGSNPSEET
TQTEELYSSPDPEKIQSPFTQKYRACRANLQSTSWLTLSSKMVYSQELSMPEGVEIISVK
PSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVVTEASSMPQYGTDSDVKYVWEEW
PLLIEEGLPSSSAINVPGRPTDVSCAHTNRLAVAYKQAASRNSHLSQDFVMHVSIFECES
TGGSSWILEQTLKLDELGTMLDSGVSVDSDLVADNQQDTSLSRGGSIIPNTKHLVHLDWM
SREDGSHILTVGIGSKLYMFGQVSGKRQEQNGSEIATVSHSGSPKAATLSGFVLLRCVDL
VSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVSTDSYSGSMPCLTSL
MKQSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSASDLSMELEDSGLFEAAHTLSPALPQ
YHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDRRLRSLTISASGSTAR
DPKMFSKTETTDYIEIDSVPPLPLYALLAADDDSSYSCSEKSNNQHCQNKKDMPNDSYEN
LFQNTVISTDDLVTFEADEDSSKVIDLSQYSPTYFGPEHAQVLSRHLLHSSLPGLTRMEQ
MSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRRHTFLTTALPPVHRAQLL
HQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGVGWWVRNIHSLRKCIEKV
AKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTEDRWRKAALKNA
FSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYESEFEVSSTYKSVL
QKRVLGSVSTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVEDEGGDGSSSCNP
AVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLGERQLFFTTAYAHLKA
GCPMLALEVLSKMPKVVKRSKLFCKSPTLVDTSKDFSPLSPVKEFETKDQASSIDWSQPV
FNGLGSSSDCSSGSHPSSSLSFDWSQPSALFQDEQLQLQSDSDENEESEDSSLVMKELKP
LKETEKLHETGSSYTESFSVVDDKDILSPSEDIISAQLKFRACLQILTVELRTLSTGYEV
DGGKLRYQLYQWLEREVVALQKTCDYGVEVEEIQSGVSRMPEEGTLYENTEDLADQEKTM
LQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQEQLVQIP
SSPPPEQNSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIINLDSPPHPDTQNSKIYV
MHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSLRTASLEETVTPNTS
PAQWPGMTALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSSNELYRIMAHP
LNNKMWSAIFGGGAHTPSKGQQQLKTKTVSSHIDDGEKQQKHYRLSSKTSAKESSQLPAL
PLVDQQSSYKERFIPPELSIWDYFIAKPFLPSQSRVEYDSEESQESDEDDEDNDGDMFAS
NSHNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHAVLKTLQR
WEQVLLRRLELYGGPPQHYISVHASEDALAAGPALLRHKSLLEPTNTPFRSSSHVALSVK
RLWQYLVKQEEVQETFIRNIFTKRRCLNEIETDLGYPGGKARIIHKESDIITAFAVNKAN
RNCIAIASSHDIQELDVSAILATQIYTWVDDDMEIENKGADDFLVIHARDDLVNVQGSTP
YTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMASHPTLPYYLTGAQDGSVRMFE
WGHAQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPLTGTSPKPYL
TWQCHNKTANDFVFISSSSLIATAGFSSDNRNICLWDTLVSPANSLVHAFICHDSGATVL
AYAPKHQLLISGGRKGFTCVIDLRLKQQQQLLQSHDSPVKAIAVDPTEEYFVTGSAEGNI
KVWSLSAFNLLHTFINEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRF
SPLKDVLKNDVKFMI
NT seq
8868 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggggaagattgcagcttcttatggaaaggtgatttgtatttttgagccagtt
agcatcttgaagcagaacaagaatgcagtgttacattaccagtggcagaagaatgctcaa
atctcactggaagccatagtgcataatctaacatgggatcctccaggtactcgtcttctg
actggttccaattgtcttcaactttggtccaatgttccattggaaaaccctactgacaat
gacagtactgaaagagcaggtgttggccttggagagtggagatgtatctggcaatgcaaa
actgcttctcaagtttgtttaatgaaattctcaccagatggggagttttttgctactgct
ggaaaggatgactgtcttgtgaaagtatggtacaatgcagagagctggcggtcagccgta
tcaccacctggtgccagtccagaaaaccgaacaaaagagcttgatttttcatttgtttat
ttggctcatcctcgatcagtaaatgcattttcatggagaaaaaccagtaaattcatgcca
cgtggtgctgtctgcaatgtactcctgacttgctgtaaggataatgtttgtcgtctctgg
gcagagactttgttacccaatgacagtctgttgtacaggggaggatacagcaattggagt
gaagcagtgaacttcacaaataacttcaagagaaatacttcaagtaaagaaaaagtgcat
agtgcattggagttaaacttgaggcacttccgacgaggaaggaggaggtcaggtgctgtt
gtagcacatactggatatgctctgcatcagcaagatcctcatgaagctcacaggaacatt
cctcctcatgcaaatgccctttgccactaccatattgctgccagtatcaatccagccaca
gatattcctctactgccttctatcacatctctaagtcttggtgaaaatgaagaaaaaagt
ggaccttttattgtacactggctaaacaacaaagaacttcattttaccttatctatggaa
gtgtttttgcaacaacttaaaaggagttttgaacatcattcccctgagactaatactgag
gattctaatcaaatggatggcagatcagaagaagaagctgatgaaaattcagatgaacag
aaaggaaaccaagagaagaaggaactgggtgatgagaaagctgctccatattcaagcctt
gttcctttatcctctgctatttttgatcatgaaattgaagttctgctttctgaatggagt
aaaaatgctgacatgctcttcagtatacatcctgtggatggctccctgctggtgtggcat
gtggactggctggatgaatatcagcctggcatgtttcgccaggtgcaggtgtcatttgtc
tcaagaattcctgttgcatttcccacaggtgatgcaaactctctttgcagaagtatagtg
atgtatgcttgtaccaaaaatgttgacttagctattcaacaaggcaaacaaaagccttct
ggccttacacgatcttcatctatgcttatctcttctggacacagtaaatcaaccaacagc
ttaaaactaagtatcttcacacctaatgttatgatgatttccaaacatgcagatgggtca
ctgaaccagtggctcgtgagttttgctgaagaatctgctttttcaaccgtactcagtatt
tcacacaaatcccgatattgtggtcaccgttttcatcttaacgacttggcttgccactca
gtgttaccactgctgcttacaacttcacatcacaatgctctaatttcaccagatgttgag
aaagcaatacagacaaatgagtcttctaagtctcaggagtcaccagtaagacctcagagt
agaggcaacgcaaatgtggcatcccaggatcccaatgctgtttacagtgaacttattcta
tggagagtagatcctgttggccctttgtccttttctggtggagtttctgaacttgctcgg
atcaattctcttcatgtttcagctttttctaatgttgcatggctgcccacacttataccc
agctattgccttggtgcatactgtaattctccaagtgcctgctttgtggctagtgatgga
cagcatttaagattatatcaagctgtaatagatgctaagaaacttctgtgtgagctctcc
aatccagaaatttctaaatacgttggagaagtttttaatatcataagtcagcaatctaca
gctcgcccggggtgtatcattgaactggacgccatcacagagcttcatggccggaaaaca
cagttattccatgtttttcaagaagactttattttaaatacccaggagaaggaaatacct
tcaaagaagagcagtttatcagactcaggaaaccagcagaatggattctctgaaaaattc
tacttaatagtgatagaatatacacaaaaccattcattactacatatgtggcatttacat
ttgaaagcaattcctgtctcaatcgatgaaaagataggttcaaatccatctgaagaaaca
acacaaacagaagaattgtattcttcaccagatccagagaagatccaatcacctttcact
caaaagtatcgggcctgtagagcaaaccttcagagcaccagctggcttactctgtcttcc
aaaatggtgtacagtcaagagttgagtatgccagaaggagtagaaataataagtgtaaag
ccatcagcaggacatctcagttcttcttccatatatcctgtttgtcgtgcaccttatctg
ctggctacttcctgctctgatggaaaagttcgattctggagatgcagggttgtcactgaa
gcttcttccatgccacaatatggcacagacagtgatgttaaatacgtatgggaagaatgg
ccattattgattgaggaaggacttcctagtagtagtgcaattaatgttccagggaggcca
actgatgtcagctgtgcacacacaaacagattagcagtggcgtacaagcaggcagcatct
agaaatagccatctttctcaagattttgtgatgcacgttagtatttttgaatgtgaatct
acagggggttcttcttggattttagaacagacacttaaattagatgaactaggcaccatg
ttggactctggtgttagtgttgatagcgatttagtggcagataaccagcaagatacttct
ctgtctcgtggtggaagtattatacccaacacaaagcacttggtacacttggattggatg
tccagggaagatggttcacatattctgacagtgggaattggatcaaaactttatatgttt
ggtcaggtgtctgggaagaggcaggaacaaaatggtagcgagattgctacagtttcccac
agtggcagtcctaaggctgcgactctttctgggtttgttttgctgcgttgtgttgacttg
gtttcatctgtggaggggtcgcctccttttcctgtatccttgtcttgggtgcgtgatggc
attctggtagttggaatggattgtgaaatgcatgtttattcccagtggcaatctccttct
aagcaggaactagttagtacagattcctacagtggaagtatgccatgcctaactagctta
atgaaacaaagccagtcagctgcctcaggtctgcatccaccaaagagaactttgaccaga
tctatgaccagccttgcacagaaacttagtgggaaaaggtctgcctctgatctgtctatg
gaattggaagattctggtctatttgaagcagctcatacattatctccagctttacctcag
taccatccgtatcaactgttggaactcatggatctcggtaaagtacgcagggcaaaagcc
attctatcccacttggtgaagtgcattgctggagaagttgttgctataaatgagtctgag
cctaatcatgacaggaggctcagatctctgacgattagtgccagtggaagcactgcaaga
gatcccaaaatgttcagtaaaacagagactacagactatatagaaatagattctgttcca
ccattgcctctgtatgctctgcttgctgcggatgatgattcatcttattcctgttcagag
aagtccaataatcagcattgtcaaaataaaaaggatatgcccaatgacagttacgaaaat
ctcttccaaaatactgttataagtacagatgaccttgtcacatttgaggcagatgaagac
agttcaaaagtcattgatctttctcaatacagcccaacttactttggaccagaacatgct
caagttctttctcgtcacttacttcattcaagcttgccaggtctgactaggatggagcaa
atgtcattgatggccttggcagatacaattgctactaccagtactgacattggagaaagc
agggacagaagtcagggtggagaaactctcgatgagtgtggtttaaaatttttattggct
gtccggcgtcacacctttctaacaactgcgcttcctcctgtgcatcgagcccagctgctt
caccaaggtttatctactagtcactttgcctgggcattccattccgtagcagaggaagag
ctcctgagtatgctccctgcagtgcagaagggtgatccaacatggtctgagctccgagct
atgggtgtaggatggtgggttcgaaacatccacagcctgcggaaatgcatagaaaaggtg
gctaaagcagctttccagagaaacaatgatccacttgatgctgccattttttaccttgca
atgaagaagaaggctgttatctggggattgtacaggtcccaaaaagatactaaaatgaca
cagttttttggaaacaactttactgaggacaggtggcgtaaagcagccttaaagaatgct
ttttctttgcttggcaaacagcggtttgaacattctgcagcgtttttcttgttggcagga
cacttaaaagatgcagtggaggtctgccttgaaaaactgcatgacattcagttggctctt
gtaatatcaagactttatgaatcggagtttgaagtatctagtacttacaaatctgtacta
cagaagagagttttgggaagtgtgtctactggaaaagagagctcaggaaacattcactgt
gaccctttcttgcgaagcatggcatactggattttggaagactatagcaaggctcttgac
actttgattaaacattctgttgaagatgaaggaggggatggctcatcgagttgcaaccct
gcagtgtttaacttctataactacctaaggacacatcccctcttgctgaggcgtcatttt
ggctcttctgacacatcttccacacacatctgcctaacagtagaaaatggattagccgac
aaaatcaacctaggtgaaagacagctatttttcaccactgcgtatgctcatctaaaagct
ggttgtcctatgttggccttagaagtgttatcaaagatgcccaaagttgtcaagaggtca
aagttattttgtaaatcccctactttagtggatactagtaaagatttctcaccattatct
ccagttaaagagtttgaaacaaaagatcaagcttccagtattgattggtcacagccagta
ttcaatggtctaggttcatcttcagattgctcatcaggaagccacccaagttcctctctt
tcctttgattggagccagccaagtgctctattccaagatgaacaattgcaactgcagtca
gacagtgatgaaaatgaggaaagtgaagattcttccctggtaatgaaagagctaaaacct
ctgaaggaaactgaaaaattacatgaaacaggttctagctacacagaatcttttagtgta
gttgatgacaaagatattctgagtccatcagaagatatcatttcagcacagctgaagttt
agggcgtgcctgcaaatccttactgtggagcttcgtacgctgtccactggctatgaagtc
gatggtggaaagttgcggtatcagctttaccagtggcttgagagagaagtggtagctctt
cagaagacctgtgattatggtgttgaagtagaagagatacagtcaggagttagcaggatg
ccagaggaaggtacattatatgaaaacactgaagatttagctgaccaggaaaaaactatg
ctacagaaagaagactttcagaaacgacgtcaatggcttctgaagtatcagtctctcctc
agaatgttccttagttactgtatacttcatggctcacacggtggaggcttggcatctgtc
agaatggaattaattttgctcttgcaggaatctcagcaggagcagttggtacagatacct
tccagccctccaccagaacaaaactccatacctctcctatttgcttgcacagctagtgcc
aaaacagtcgtggctaatccattgctacatcttagcaatttaactcatgatatattacat
gctataataaaccttgattcaccacctcatccagatactcagaacagcaagatatatgta
atgcataccttagcagcgtcgctctctgcttgcatctaccaatgtctctgtgatggccac
agctacagctcatttcaagcaaatcaattcactggaacagtgtaccagaccgtcctgtta
actcagcgtcattctttaagaacagcaagcttagaagaaacagtgactcccaacacatca
cctgctcagtggccaggaatgacggctctaatacgtctcttgaattctgctggtgaggaa
gcccagccaggtctcacagttctactttgtgaaattctaactgcagtctatctcagcctg
ttcatccatggccttgcaacacattctagcaatgagttgtatagaattatggctcatcca
cttaacaacaaaatgtggtctgctatctttggaggaggagctcatacgcccagcaaagga
cagcagcaattaaagacaaaaactgtttcttctcacatagatgatggagagaaacagcaa
aaacattacaggctttcatcaaaaacctctgcaaaagagagttctcagttgcctgcattg
ccattggtagaccaacagtcatcttacaaagaaagatttatccctcctgagcttagcatc
tgggattatttcattgcaaagccatttcttccatcgcaaagtagagtggaatatgattca
gaagagagtcaggaaagtgatgaagatgatgaagacaatgatggagatatgtttgcatca
aattcacataaccaagagcattctaattcaaattcttacagttggtcactgatgagattg
gcaatggttcagctggtacttcacaatttgaagattttctaccctttggctggacatgat
ctttcagagcttccagttagctccccgatatgccatgcagttttgaaaactttacagcgc
tgggaacaagttcttctccgacgtcttgagctgtatgggggtccacctcaacattatatt
tcagttcatgcttctgaagatgccctcgctgctggtcctgcgttgcttcgccacaaaagt
ttacttgagcctacaaacactcctttcagatctagcagtcatgttgcactgtctgtgaag
aggctctggcagtacttggtcaaacaggaagaagtccaggaaacttttatcagaaatatt
tttaccaagaggcgatgcctaaatgagatagaaacagatttgggataccctggtggcaaa
gcgagaataatccataaagagtcggacatcattactgcttttgcagtcaataaggcaaat
cggaactgcattgcaatagcatcaagtcatgatattcaagaattggatgtttctgcaatt
ttagctacgcaaatctacacctgggttgatgatgatatggaaatagaaaataaaggggct
gatgatttcctagttatacatgctcgtgatgatctggtaaatgttcagggaagcactcct
tatactcacagtaatcctggcacacctatcaatatgccttggcttggtagtacacaaact
ggcaggggtgcatctgtgatgctcaagaaagctattaataatgtcagaagaatggcttct
catccaacactgccatattacctgacgggtgctcaggatggaagtgtgagaatgtttgaa
tggggtcatgcgcagcagatcacatgttttcgatctggtggcaactcacgggtaactcga
atgcgattcaattaccaaggaaataagtttggaattgttgatgctgatggatatataagt
ttatatcagacaaattggaagtgttgtccacttactggaacctcacctaagccatatttg
acatggcaatgtcataacaaaacagccaatgactttgttttcatcagttcatcatcattg
atagctacagcaggattttcttctgacaacagaaatatttgcctttgggatactctggtt
tctcctgcaaacagcttggtgcatgcttttatctgtcatgatagtggagcaactgtgcta
gcatatgctccaaaacaccagctgttgatatctggaggcagaaaaggctttacctgtgta
attgatcttcgcctaaagcagcagcaacagttactccagagtcatgattctccagtcaaa
gcaattgctgttgatcctacagaagagtattttgtcacaggatctgctgaaggcaacata
aaggtatggagtctgtctgcatttaatcttcttcacacgttcatcaatgagcatgctcga
cagtctctcttcagaaacattgggacaggagtcatgcaaattgaaacaggaccagcaaat
cacatattctcctgtggtgctgatggaacagtaaagatgagaatcttgcctgatagattt
agccctttaaaggatgtgttaaaaaatgatgtgaaatttatgatctaa
DBGET
integrated database retrieval system
