Geospiza fortis (medium ground-finch): 102036220
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Entry
102036220 CDS
T03755
Symbol
USE1
Name
(RefSeq) unconventional SNARE in the ER 1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102036220 (USE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102036220 (USE1)
Membrane trafficking [BR:
gfr04131
]
SNARE
SNAP-25[C] (Qc)
Use1
102036220 (USE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Use1
MCU
EssA
DUF4870
DUF7610
Synaptonemal_3
Peptidase_M56
NEDD4_Bsd2
CCB2_CCB4
Mononeg_mRNAcap
DUF6548
Orf78
Motif
Other DBs
NCBI-GeneID:
102036220
NCBI-ProteinID:
XP_005429557
UniProt:
A0A6I9HU43
LinkDB
All DBs
Position
Un
AA seq
218 aa
AA seq
DB search
MLRELKKQSSKPAPELLNEYSRKVDFLKGLLEAEKLSSSTEKALANQFLAPGRTPTTAKE
RTPATKTVHLQTKARCTGQMRSELLGTDPLATDDSEELNIRRRKGLTSDEKQSAVELDAV
LQHHQDMQEKLAEEMLSLARSLKNNTLAAQNVIKQDNQTLSHSLRMADQNFEKLKDESDR
LEQHAKKSVNWLLWIMLIVVCFIFISMILFIRIFPKLK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggaactgaagaagcagtccagcaagccagcccctgaactgctgaatgaatac
tctcgtaaagtggactttttaaagggactcctagaagctgaaaaattgtcttcatccaca
gaaaaggctctggcaaaccagttcctggccccggggcgcaccccaacaacagccaaggag
agaaccccggccaccaaaaccgtgcacctgcagaccaaggcgcgctgcacgggccagatg
aggagcgagctgcttggcacagaccccctggctactgatgattctgaagagttgaacata
aggaggcgaaaaggcctcacatcagacgagaagcagtcggcagtggagctggatgctgtg
ctgcagcatcaccaggacatgcaggagaagctggctgaggaaatgctcagcttggctcgc
agcctcaaaaacaacactctggctgcccagaacgtgatcaaacaggacaaccagacactg
tcacactccctcaggatggcagaccagaacttcgagaagctcaaggacgaatccgaccgc
ctggaacagcacgccaagaaatctgtcaactggctgctctggataatgctaattgtagtt
tgttttatattcatcagcatgattctcttcatcaggattttccccaaactgaaatga
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