Geospiza fortis (medium ground-finch): 102036244
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Entry
102036244 CDS
T03755
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102036244 (AFF3)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102036244 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
102036244
NCBI-ProteinID:
XP_014162090
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All DBs
Position
Un
AA seq
1097 aa
AA seq
DB search
MGSKPKELEAIVPQENCNNMVTVTEVWRGDFHRWSAAVDGCEHLRRDSVYEPDRNVLRRK
EWERRNQEAQQDNGTFNTSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDLLTDRSNQS
HLVGVPKPGVPQTSLPKTDEHLIADSRPPPPPPPPISSTTSSTPASLAAQQSKSATMGWQ
KAGHNATSDGQQRASKHGHRSLESHKGDFKLASQKSNLEKLKRYASSPTSSSSSSSSSSS
SSSSSSSSSNTAQQSSLRATLGDNTNRVQQAAKLSCSSEGGTKVQERPAKHGGGHCVQNF
PPSLASKPSLGQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSYRGVPSSKPDSARTKS
KITKFSIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGKAEQSKFPFPNKESQQ
GSTGHSNTRKSDVEPKTPEKSATHTSMLEDDLKLSSDEEENDQQAAQRSALRVLSDSSLV
VPQANARASGLSSKGWSSSSSSESESSSESDSESESSSSESDGSKASHYSSPEPEPPSSN
KWQLDKWLNKVTPHKAPILTHPDGPALEAHPYYGRVKAERQEGQKTPAEGSAEHRTFGSI
NARTSSEIAKELEEQFYTLVPFGRNELLSPLKDSDEVKSLWVNIDLALLSRIPERLPEEP
LAMSAGANQAASFPQGSSAEPPAEKGLPKSRRKRKCENEEECRDIKKTHLERESSSRLAA
SAQSITTANHCNMNENSLAIPINKNEKMLRSPVSPLSDASKHKYSNDDLTSSSRPNGSSL
LPSISSSKKHKGEIQSQPHPGDFNKAIHINSENVLLCNKPQFQTEPWSPLSTTPRDCRRT
KLIFDDIPRNADYFMQEAKRKKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESK
SPYTMYSETVELIRYAVRLKTHSGPSATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKY
SKALIEYFKNSSKAAQNPSPWSASGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPSPIIS
IPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENRDFFNDLDALMGPITLHSSMEHLV
QYTQQGLHWVRNSAHLS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaaacccaaggagctggaagccatcgtgcctcaggaaaactgcaacaacatg
gtcactgtcacagaggtgtggcggggtgactttcaccgctggagtgctgcagtggatggc
tgcgagcacctcagaagggacagtgtctatgagccagacagaaatgtgctgcgaaggaag
gagtgggaaaggagaaaccaggaggcccagcaggacaatggcacgtttaacacgagctat
tctctcttcagtgaaccctacaagactaacaagggggatgagctttccaatcgcatccag
aatactttgggcaactatgatgaaatgaaagacttgttaactgaccggtcaaaccagagc
catctcgttggggttccaaaacctggggttcctcagacatctctccccaagactgatgaa
catcttatcgcagactcgagaccaccacctcctcctcctcctccaatttccagcactact
tcttccacaccagcatccctagctgcccagcagagcaagagcgccacaatgggctggcag
aaggctgggcataatgccacttcagatggccagcagagagcgagcaaacacggacaccgg
tcgctggagtcacacaagggtgacttcaaactggccagccaaaaatccaatttggagaaa
ctaaaacgctatgcatcgagtcccacctcctcctcttcctcctcctcttcctcttcctcc
tcctcctcctcttcctcctcttcctccaatactgcccagcaaagctcgctgagggccaca
ttaggagacaacaccaacagagtccagcaggcagcgaagctcagttgtagctcagaagga
ggaaccaaagtccaagagaggccagcaaagcatggtggggggcactgtgtccaaaacttc
ccaccttctcttgcttcaaagcccagtctgggtcagcagaagccaacagcctatgtaagg
ccaatggacggtcaggaccaggctccagatgagtctccaaagctgaagttaccagcagag
acaaccaagtcatatcggggagtgccttccagcaagcctgattcagccaggaccaagtca
aagatcaccaagttcagcattcctaagcaagaagaagacagtggaacaggagataacagc
tgcattgaagaaatattgcgggagatgacccattcatggcctccgccactgtcagcaatt
cacacaccaggaaaggcagaacaaagcaagtttcccttcccaaacaaggagtcacaacag
ggatctacaggacacagcaatacaaggaaaagtgatgtagagccaaagaccccagagaaa
agcgcaacccatacatcgatgctagaagatgacctcaagttaagcagtgatgaagaggag
aatgaccagcaggcagcacagagatctgctctccgcgttctatctgacagcagcctggtg
gtgccgcaggccaatgcccgagcctcgggactctccagcaagggctggagcagcagcagc
tccagtgaatccgagagcagctccgagtctgactcagagagcgaaagcagctccagcgag
agtgacggcagcaaggcctcgcactactccagcccagagcccgagccaccctcgtccaac
aagtggcagctggacaagtggctgaacaaagttacccctcacaaagcacccatcctcacc
caccccgatggcccggcgctggaagcccacccctactacggccgcgtgaaggcagagcgg
caggaaggacagaagaccccggctgagggctcggccgagcatcgcacctttggctctatt
aatgccaggactagtagtgaaatagcaaaggagctggaggaacagttttacaccctggtt
cctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggtaaaatcgctg
tgggtcaacattgacttggctcttttgtccaggattccagagcgtttgcccgaagaaccg
ctggccatgagcgccggagcaaaccaggcggccagcttcccgcagggtagtagtgctgaa
ccccccgcagagaagggtttaccgaaatctagaaggaaacgcaagtgtgagaatgaggaa
gagtgcagagatatcaagaagacccacttagagcgagagagttcttcacgattagctgcc
tctgcccaaagcatcacaacagcaaatcactgcaatatgaatgaaaatagcttggcaata
ccaataaataaaaatgagaaaatgcttcggtcacccgtctctcccctctctgatgcatca
aaacacaaatattccaacgatgatttaacttcctccagcagacctaatggcagcagtcta
ttaccttcaatctcctccagcaaaaaacataagggtgaaatccagtcacagccacatcct
ggggacttcaataaagcaattcacatcaattcagaaaatgttcttctctgcaataagcca
cagttccaaacagagccttggtcacctctgtccaccacacccagggactgcagaagaaca
aagcttatctttgatgatataccacgcaatgcagattactttatgcaggaagctaaacgg
aagaagcataaagcagatgcaatggtggagaagtttggaaaggcactgaattatgcagaa
gcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaatctaaa
tccccttataccatgtattcagagacagttgaactcatcaggtatgcagtgagactaaaa
acccactcaggccccagcgccacgccagaagacaaacagctggcagcattatgttaccgc
tgcctggcccttctgtactggaggatgttccggctcaagagagaccacgcggtcaagtat
tcaaaagcgcttattgagtatttcaagaattcatcaaaagctgcccagaacccatctcct
tggagtgccagtggaaagagcacaggaactccatcacccatgtcccctagcccttctcca
gtcagttctgtaggatcccaggggagcacgggggccccttccccatctcctatcatcagc
atcccgcagcgcattcatcagatggctgccaaccacgtcagcatcaccaacagcatcctg
cacagctatgactactgggagatggctgacaacctggccaaggaaaacagagattttttt
aacgacttggatgcattgatgggacctatcaccttgcacagcagtatggagcatttagtc
cagtacactcaacaaggacttcactgggtgcggaatagtgctcacttgtcataa
DBGET
integrated database retrieval system