Geospiza fortis (medium ground-finch): 102036316
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Entry
102036316 CDS
T03755
Symbol
TOP3A
Name
(RefSeq) topoisomerase (DNA) III alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03440
Homologous recombination
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102036316 (TOP3A)
03460 Fanconi anemia pathway
102036316 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102036316 (TOP3A)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102036316 (TOP3A)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102036316 (TOP3A)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Topoisomerases
102036316 (TOP3A)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102036316 (TOP3A)
FA (Fanconi anemia) pathway
102036316 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
102036316
NCBI-ProteinID:
XP_005426049
UniProt:
A0A8N5ETK8
LinkDB
All DBs
Position
Un
AA seq
1011 aa
AA seq
DB search
MNVSVRLFRRARMLPQPWRCFSRAAEELALQRIRKVLCVAEKNDAARGIAELLSNRRMRR
REGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFIMPFRKWHSCNPLALFDAEIEK
FCPENYLDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCRAVKPNLQVFRARFSE
ITPHAVRAACENLTQPDQRTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLVLY
QMCMEDPVATVVDVVSKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGFI
SYPRTETNIFPKELNLSALVEQQTQDPNWGGFAQRILDEGGPTPRSGTKSDQAHPPIHPT
KYASNLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANEQFIAQGLMILARNYLEV
YPYDKWSDKVIPLYQKGSHFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGQLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYLGEAAEVPEQDEVYPATPLSVQKCPQ
CNSDMVLKTRKNGGFYLSCMGYPACKTAVWFPDFVVDVTRDESICDVCKPHPVHRLKFKF
KKGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRSSQPASSTTQPGHRLQANHSLNRSS
SETRQARGTSNQARGHLLSINSSRTPRAAPPAAADDGNAVVCNCGSEALLLTVRKDGPNK
GRQFYKCSSGTCNFFLWADEQPQDRGSSTPLQPAAGRTPAGFQRPGGGREPLGSSSWDAA
GGGGTVCRCDQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENMAPGPSGDDSL
NHFGSNGYSRGLGSKAKRPGNLSSASAAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtccgtgcggctgttccgcagggccaggatgctgccccagccctggcgctgc
ttctcgcgggccgcggaggagctggcgctgcagaggatccgcaaagtgctctgcgtggcc
gagaagaacgatgctgcccgaggcatcgccgagctgctctccaacaggaggatgcggcgg
cgagaagggttttccaagttcaacaaaatctatgaatatgactaccagatgtttggccag
aacgttaccatggtgatgacatccgtgtcaggacatttactggctcatgattttatcatg
ccatttcgcaaatggcatagctgcaaccctttagctctttttgatgctgaaattgagaag
ttttgccctgaaaattacctggacattaagagaacccttgaacgagaaatccagcagtgc
caagccctggtgatctggactgactgcgatcgagaaggagagaacattggctttgagatc
atccatgtgtgcagagctgtaaagccaaacctgcaggttttccgagcacggttctccgag
atcacccctcacgctgtcagggcagcctgtgagaacctcacccagcctgaccagagaacc
agcgacgccgtggacgtcaggcaggagctggacctcaggataggtgctgccttcaccaga
ttccagactctgaggctgcggaagatcttccctgatattttagcagatcagctgatcagc
tatggcagctgccagttcccaacactgggatttgtagttgaacgctttaaagccatccag
gcttttgttcctgaagccttctacaaaattaaagtgacccatgaccatgaggacggcagc
gtggtcttcaactggaagaggaaccggctcttcaatcacacggcgtgcctggtcctttac
cagatgtgtatggaggatccggtagcaactgttgttgatgttgtgagcaagccaaagagc
aaatggaggcccctgcccctggacactgtggaactggaaaaattggcttcccgcaaactg
aaaataaatgcaaaggaaacaatgacaatagcagaaaaactctatactaaagggttcatt
agttaccctcgaactgagaccaacattttccccaaggagctgaacctctctgccttggta
gaacagcaaacacaggacccaaactggggagggtttgcacagaggattttggatgagggt
gggccgacccctcggagtggaaccaaatctgatcaggctcaccctcccattcaccccaca
aaatacgccagcaacttgcagggcaatgagcagagactctatgagttcatcgtgcgccac
ttcttggcttgctgctctcaagatgccaaaggacaggaaacaactgtggagatcgacatc
gccaacgagcaattcattgctcaaggactcatgatcctggccagaaattacctggaagtg
tatccctatgacaagtggagtgataaggttatcccgctgtatcagaaagggtctcacttt
cagcccaccacggtggagatggtggatggggaaaccagtcctcccctgctcctcacagaa
gcagatctcattgctctcatggaaaaacacggcattgggactgatgccacccacgccgag
cacatcgagacgatcaagacgcggatgtacgtggggctcacggcagatcagcgcttcctg
cccggccagctgggcatggggctggtggaaggctatgattccatgggctacgagatgtcc
aagcctgaccttcgagctgagctggaggctgatctaaaactgatctgtgaggggaagaaa
gacaaatctgtagtgttgcagcagcaggtccagaagtacaagcaggtcttcattgaagct
gtggccagagccaacaagttagaccaggccctggctcagtatctgggagaagctgcagaa
gttccagagcaggatgaggtgtacccagcaacgcccctttctgttcagaaatgtccccag
tgcaacagtgacatggtcctgaagaccaggaagaatggcgggttctacctcagctgcatg
ggctatccagcctgtaaaactgcagtctggttccctgatttcgtggtggatgtgaccagg
gatgagagcatctgtgatgtgtgtaaaccccatccagttcacagactgaagtttaaattc
aagaagggcagcgttccccctgtgatgcccctggagttcgttggctgcattggaggctgt
gatgagatgctgaaagagcttttggacctcaagtacttgcacagatcatcccaacctgca
tcctccaccacccaaccagggcaccgcctgcaggccaaccattccctgaacagatccagc
agtgagaccaggcaagccagggggacctcaaaccaggcacggggacacctgctctccatc
aactcctccaggacccccagggctgctcctccagctgctgcagatgatggcaatgctgtg
gtgtgcaactgtgggagcgaggcgctgctgctgaccgtgcgcaaggacggccccaacaag
ggccgccagttctacaagtgcagctccggcacctgcaacttcttcctctgggctgacgag
cagccacaggacagaggcagctccacgccgctccagcccgctgctggaagaaccccagca
ggattccagcggccaggaggaggcagggagcccttgggaagcagcagctgggacgctgca
ggtggcggtggcacggtgtgcaggtgtgaccagcccgcggtgacacgcaccgtgcagaag
gacggccccaacaaggggaggcagttccacacctgccccaaaccccgggagcagcagtgt
ggcttcttccagtgggcagatgagaacatggcaccaggcccttctggagatgactctttg
aaccactttggcagcaatggatactccagagggttgggaagcaaggccaagagaccaggc
aatctctcctcagcatctgctgccaagaagccacggacctgcagcatttgccaccagcct
gggcacacgaggaaaacctgccctcagaaccactga
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