Geospiza fortis (medium ground-finch): 102036349
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Entry
102036349 CDS
T03755
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102036349
Enzymes [BR:
gfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
102036349
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
102036349
Prokaryotic type
102036349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
CLIP_1
Motif
Other DBs
NCBI-GeneID:
102036349
NCBI-ProteinID:
XP_005419165
UniProt:
A0A6I9HFQ2
LinkDB
All DBs
Position
Un
AA seq
474 aa
AA seq
DB search
MAGGRRRAAPSVREFKYNKKRVRLVSQGSDLKDDARCILYWMCRDQRVQDNWAFLYAQRL
ALKQELPLHVCFCLVPKYLEATIRHYRFMLRGLQEVAEECAELNISFHLLLGYAKDVLPT
FVMEHGVAGLVTDFSPLRLPRQWVEDVRERLPEDVPFAQVDAHNIVPCWLASPKQEYSAR
TIRSKIHAQLPEFLTEFPPVVRHPHPPSCPAEPIAWEACYSSLQVDHTVKEVEWATPGTA
AGMAVLKSFIAERLKSFSSHRNDPNKAALSNLSPWLHFGQVSTQRAILEVQKHRRSYKDS
VDAFVEEAVVRRELAENFCYYNENYDSVQGAYDWAQTTLKVHAKDKRPYLYSLQELEQGT
THDPLWNAAQLQMVREGKMHGFLRMYWAKKILEWTRSPEEALQFAIYLNDRYELDGRDPN
GYVGCLWSICGIHDQGWAERPIFGKIRYMNYAGCKRKFDVEQFERRYAPTHSHL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggccgtcggagggcggccccgtccgttcgagagttcaagtacaacaaaaag
cgggttcgccttgtctcgcagggctcggacctgaaggatgatgctcggtgcatcctttac
tggatgtgccgggatcagcgagtgcaagataactgggctttcctctacgcccagcgcctg
gccctcaaacaggagctgcctctgcatgtctgcttctgcttggtgcccaaatatctggag
gccaccatccgccactacaggttcatgctgaggggcctgcaggaggtagcagaggagtgt
gcagagctgaacatctccttccacttgctgctgggctatgccaaggatgtgctgcccaca
tttgtgatggagcatggcgtggctgggctggtgacagacttcagtcccctccgcctcccc
cggcagtgggtagaggacgtcagggaacgcttgccagaggatgtgccatttgcacaggtt
gatgcccacaacatcgtgccctgctggctcgcctcccccaagcaggagtacagcgccaga
accatccggagcaagatccatgctcagctccctgagttcctcaccgagtttccccctgtt
gttcgtcacccacatccgccctcctgcccagcagagcccatcgcttgggaggcctgttat
tccagcttgcaggtggaccacaccgtgaaggaggtggagtgggcaacccctggcacagct
gcagggatggctgtgctcaagtccttcattgcagagcggctgaaatccttcagcagccac
aggaatgatcccaacaaggcggctctcagcaacctgtccccgtggcttcactttggccag
gtttccacccaaagagccatcctggaggtgcagaagcaccggcgcagttacaaggactcg
gtggatgcgtttgtggaggaggctgtggtgcggcgggagctggctgaaaacttctgctac
tacaatgagaactacgacagtgtgcagggtgcctatgactgggcacaaaccaccctgaag
gtccatgccaaagacaagaggccttatctgtacagtctgcaggagctggagcaggggacc
acacatgacccgctctggaacgctgcccagctgcagatggtccgggagggcaagatgcac
ggcttcctgcggatgtactgggccaagaagatcctggagtggacacgctcccctgaggag
gccctgcagtttgccatctacctcaacgaccgctatgagctggacgggagggaccccaat
ggatacgtaggctgcctgtggtccatctgtggcattcacgaccagggctgggcggagcgg
cccatcttcggcaagattcgctacatgaactacgccggctgcaagcgcaagtttgacgtg
gagcagttcgagcgtcgctatgcccccacacactcccatctctga
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