Geospiza fortis (medium ground-finch): 102036422
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Entry
102036422 CDS
T03755
Symbol
ZYG11B
Name
(RefSeq) protein zyg-11 homolog B
KO
K10350
Zyg-11 protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102036422 (ZYG11B)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102036422 (ZYG11B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
LRR_At5g56370
LRR_EndoS
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
102036422
NCBI-ProteinID:
XP_005423006
LinkDB
All DBs
Position
Un
AA seq
744 aa
AA seq
DB search
MPKKRSHTLVEEASPYSLLDICLNFLTANLEKFCTERQDGTFCLQEPGMFPQEVADRLLQ
TMAFHGLLNDGTVGIFRGTQMRLKRACIRKAKISAVAFRKAFCHHKLVELDATGVNADIT
ITDIISGLGSNKWIQQNLQCLVLNSLTLSLEDPYERCFSQLSGLRALSITNVLFYNEDLA
DVASLPRLESLDISNTSVTDITALLTCKDRLKSLTMHHLKCLKMTTTQILDVIRELKYLN
HLDISDDKQFTSDIALRLLEQKDILPNLVSLDISGRKHVTDKAVQAFVLQRPTMQFVGLL
ATDAGYSEFLTGEGNLKVSGEANETQISEALKRYSERAFFVREALFHLFSLTHVMEKTKP
EILKLVVMGMRNHPLNLPVQLAASACVFNLTKQDLAAGMPVRLLADVTHLLLKAMEHFPN
HQQLQKNCLLSLCSDRILQDVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVRQLLQIVKQKTNQNLVDTTLKFTLSALWNLTDESPTTCRHFIENQG
LELFMRVLESFPSESSIQQKVLGLLNNIAEVKELHSELMWKDFIDHISKLLHSVEVEVSY
FAAGIIAHLISRGEQAWTLSRSQRTSLLEQLHTAILNWPTPECEMVAYRSFNPFFPLLGC
FMTPGVQLWAVWAMQHVCSKNPARYCSMLIEEGGLQHLYNIKENVHTDPHVQRIAVAILD
SLEKHIMRHGRPPPCRKQQQTKPN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaaaggtcccacacactcgtagaggaagcttctccatattctttacttgat
atctgtttgaatttcctgactgccaacctagagaagttctgcacagaaaggcaagatggg
acattttgcttgcaggagccaggaatgttccctcaagaggtggctgatcgactgttgcag
acgatggcatttcatgggctgctgaacgatggcaccgtgggcatcttccggggcacccag
atgcgcctgaagcgcgcctgcatccgcaaagccaaaatctccgccgtggctttccgcaaa
gccttctgccatcacaaactggtggagctggatgccacgggggtcaatgcagatataaca
atcacagacattatcagtggactgggcagcaataagtggatccagcagaatctgcagtgc
ctggtgctgaactcactgactctttctctggaagacccctacgagaggtgtttcagtcag
ctgtccgggctccgcgcgttgagcatcaccaacgtgctcttctacaacgaggacttggca
gatgttgcttcgcttcccaggttggaaagtctggatatatccaacacctctgtcactgac
ataacagcactcctcacctgcaaagacaggctcaagtctttgaccatgcaccacctgaaa
tgcttgaaaatgaccacaacccagattctggatgttataagagaactaaaatacctgaat
caccttgatatttcagatgacaaacagttcacatcggacatagctcttcgtttactggaa
cagaaagatatcttgcctaacctcgtgtctttggacatttctggaagaaaacatgtgaca
gataaagctgtacaagcattcgttctgcagcggcccacgatgcagtttgtaggactgcta
gctactgatgccggctactcagagttcttaacaggagaaggaaacctgaaggtgtcagga
gaagcaaatgaaactcagatttcagaagcactgaagcggtacagtgaacgggccttcttt
gtgagagaagcactctttcatttattcagcctgacacatgtaatggaaaaaactaagcct
gaaattttaaagctggtggtgatgggcatgaggaaccaccccctgaacctgcccgtgcag
ctggcggcaagcgcctgcgtcttcaacctcaccaagcaggacctggcggccggcatgccc
gtgcggctcctggcagacgtcactcacctgctcctcaaggccatggagcacttccccaac
catcagcagctgcaaaagaattgccttctttcactatgcagtgacagaatccttcaggat
gtcccatttaacaggtttgaagcagccaaacttgttatgcagtggctgtgcaatcatgaa
gatcaaaacatgcaaaggatggctgtagccataatttccattcttgctgcaaagctttca
acagagcaaacagctcaacttggtgcagagctcttcattgttaggcaacttctacaaata
gttaaacagaaaacaaatcagaatcttgtagataccaccctcaagttcacactgagtgca
ctttggaacctcacagatgaatctcccacaacatgtcggcactttattgaaaaccaaggg
ctagaacttttcatgagagtcttagagtcttttccatctgaatcatccatccagcagaaa
gttcttggacttttgaataacatagctgaagtgaaagaactccattctgagttaatgtgg
aaggacttcatagaccacatcagtaaattgttgcacagtgtggaggtggaagtcagctac
tttgcagcagggattattgctcatctgatatctcgaggagagcaggcctggacattgagt
cgcagccagaggacatctctccttgaacagctgcatactgccattttgaattggccaacc
ccagaatgtgagatggtggcttacaggtctttcaatccatttttcccactacttggctgt
ttcatgacacctggtgtccagttatgggcagtgtgggccatgcagcacgtctgcagcaaa
aatcccgccagatactgcagcatgttaattgaagaaggtggtttgcagcatttgtacaac
atcaaggaaaatgtccacactgatccccatgtccaaaggattgctgttgccatcttggat
agtttagaaaaacacattatgcgccatgggagaccaccaccgtgtagaaaacagcaacaa
accaaaccaaattga
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