Geospiza fortis (medium ground-finch): 102036491
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Entry
102036491 CDS
T03755
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102036491 (TRAPPC10)
Membrane trafficking [BR:
gfr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
102036491 (TRAPPC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
UFD1_N1
PPC
Motif
Other DBs
NCBI-GeneID:
102036491
NCBI-ProteinID:
XP_014165027
LinkDB
All DBs
Position
Un
AA seq
1368 aa
AA seq
DB search
MEAGRALEQRPREGVQSPCLETFQTHLNTFVPASPALGDLAWAGGWTERSQEVTERSPEV
TERSPAVTPTPTLPSLPPAVTAQGGPGGLCLSGASGPPSGAGGWTERSPEVTDRSPEATP
TPTIPCLPPAVTAQGLCPSGRAGDQNLFTSLYPTLSQQLPREPMEWRRSYGRAPKMIHLE
SNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKTTVKDDITKWQNVLKAHSSVD
WLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRSQESWNAF
LTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVRSWNGLILRKPIDMEKRELIQNQEAT
LLDLRSYLFSRQCTLLIFLQRPWEVSQRALELLHNCVQELKLLEVSVPPGALDCWVFLSC
LEVLQRIEGCCDRAQIDANVSHTVGLWSYATEKLKSLGYLCGLVSEKGPNSEDLNRTVDL
LAGLGAERPETANASQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTNIGRIRSAKLVG
KDLAEFYMRKKGPQKAEVYLQGALKTYLAEGWALLVTHTRKQLAECQKQLGQIENYLQTS
SLLAGDNHLTEEERKRFCQEILDFTNQQAENQGQKVILPMHSFAQLKTLHFDPPNAVVHV
GGKLSIELTLLSQMPIPVQVDQVAIHVHFSIEKNSYRKTAEWLTKHKTSNGVISFPSEIT
GLPLSSNSLPXPLKQEKDXSPGIICKNAHMLLRRQESSSSLDVPSGLTLEDGAHVLKCNN
LTLEPGDNKITFNIQAKEPGTYTLRQLCTSVGKVQFVLLHIYPIVQYDVYSQEPQLKVEP
MTESLLAGIPQKVKFTVTTGHYSMKSGDTLQLSNADAMPILYHPESKAVIYSNTREKISE
SSLRIQSSEKITSISLPVAPAYHVIEFELEVMYLPSATESAVEKENTTNKENHRKNKEKQ
KQDNCMATVDQKVTIDCPWSIYSTIIALTFCIPFNAKHSLLSAGKRKYVQVCVQNLSELC
FQLSDYSLKNSAECTDLQLVPLNPASQQVMYSKQSIFFVWELKWTKELPLSLQCLFSVSF
CPATSEEQSLILKPFTYEFQVENFFTLYHVKTEIFPPLDAEYCKTGSLCSLEVSITRLVE
LSEVDRDEALTESDGYCTTKLMYEVVDNSSNWAVCGKSSGVISMPVAPRATHKVHMEVMP
LFAGHLPFPDVRLFKYLPHHSAHSMQLDADSWIENDNLSVDKNVDEHADSSSIRSRGSLH
STASGEHKGLPMPRLQPFSPGQVFNSSTGMQILVIPSKDDHVLEVNVT
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggcagagctctggaacagcggcccagggagggtgtgcagtctccctgtctg
gagacattccagacccatctgaacacgttcgttcctgcgtcacctgctctgggtgacctt
gcctgggcaggaggatggactgagcgatctcaggaggtcactgagcgatctccggaggtc
actgagcgatctccagcggtcactccaaccccgacccttccgtcactcccgccggctgtc
accgctcagggcggcccgggggggctctgcctctcaggcgcctcgggccctccctcaggg
gcaggaggatggactgagcgatctccggaggtcactgaccgatctccggaggccactcca
accccgaccattccgtgcctcccgccggctgtcaccgctcaggggctctgcccctcaggc
cgcgctggagatcagaatttatttacttccttgtatcctacactttctcagcagcttcct
agagaacccatggaatggaggaggtcttacggccgtgctccgaagatgattcacctggaa
tccaactttgtgcagtttaaagaggagctactacccaaagaggggaataaagcccttttg
acttttcccttccttcatatttattggacagaatgttgtgacacggaagtgtacaaaacc
acagtcaaggatgacatcaccaagtggcagaacgttctcaaagctcacagctcagtggac
tggctgattgtggtggttgagagtgatgccaagaaaaagaacaaaaccaacatccttccc
cgaacctctatagtagataaaataaggaatgacttctgtaacaagcaaagtgacagatgt
gtggtactttctgaccctttgaaagactcttcccgttctcaggaatcttggaatgccttc
ctgaccaaactcaggacattgcttctcatgtcctttaccaaaaacttaggcaagtttgaa
gatgacatgagaactctgagagagaaaaggactgagccagggtggagcttctgcgagtat
ttcatggtccaggaagagctggcctttgtctttgagatgctgcagcagtttgaggatgcc
ctggtgcagtatgatgagctggatgccttgttctctcagtatgttgtcaactttggggct
ggtgatggtgcaaactggctgacgtttttttgccagccagtgaggagctggaatggttta
attctgaggaagccaatagacatggagaagagagagctgatccagaaccaggaggccacg
ctgctggacctgcgcagttacctgttctcccggcagtgcaccttgttaatcttcctgcag
aggccatgggaggtgtcccagagagcactggagcttcttcacaactgtgtgcaggagctc
aagctgttggaagtctcagttcctcctggagctttggattgctgggtatttttgagttgc
ttggaagtcttacaaagaatagaaggctgctgtgatagggctcaaatagatgcaaatgtt
tcccacacagttggcctgtggagctatgccacagagaagttaaaatctctgggttacctg
tgtggacttgtgtcagagaagggacccaattcagaagaccttaacaggactgtggatctg
ttagcagggctgggagcagaacgccctgaaacagccaatgcatcacagagcccttacaag
aaactcaaagaggccttatcatctgtagaagcttttgaaaaacactacttagatctgtcc
catgccaccattgaaatgtacacaaatattggaagaattcgctcagctaagcttgtggga
aaggacttggcagagttttatatgaggaagaagggtccccagaaggcagaggtgtatctt
caaggagcactgaaaacctaccttgctgagggctgggctctgctggtcacacacacgagg
aagcagctggctgagtgtcagaagcagcttgggcagatagaaaattatctccaaacaagc
agccttttagctggtgataatcacttaacagaagaggaacgcaaaagattttgccaagaa
atacttgattttaccaatcagcaagcagagaaccaaggtcaaaaggttatattgcctatg
cactcctttgcccagctgaaaactctgcattttgaccctccaaatgctgttgtccacgtg
ggtggaaagttgtccatcgagttgactttgctgagccaaatgcccatccctgtccaggtg
gaccaggtcgccatccacgttcacttcagcatcgagaagaacagctacaggaaaacagcc
gagtggctcaccaagcacaaaacttccaacggtgtcatcagcttcccaagtgaaattaca
ggcttgcctttgtccagtaacagcctgccancaccattaaaacaggaaaaggattaatcc
ccaggaatcatctgcaagaacgcgcacatgctgctgcggcgccaggagagcagcagctcc
ctggatgtgccctcagggctcactttggaggatggggctcatgttctgaagtgcaacaac
ttgactctggaaccaggggacaataaaataaccttcaatattcaggccaaagaacctggg
acatacacgctcaggcagctgtgcacttcagtgggaaaggtgcagtttgtccttcttcac
atctaccccatcgtgcagtacgatgtgtactcccaggagccccagctcaaagtggagccc
atgactgagagccttttggctggcattccccagaaggtgaagttcacagtgaccactggt
cactacagcatgaagagcggggacactctgcagctgagcaacgccgatgccatgcccatc
ctgtaccaccccgagagcaaggctgtcatctactccaacaccagggaaaagatctcagag
tcatcattaaggattcagtcttctgagaagatcacaagcatcagcttgccagtggcccct
gcttaccatgtgattgaatttgaactagaagtcatgtatttgccatcagccacagaatct
gcagtggagaaggaaaatactacaaataaagaaaatcacagaaaaaacaaagagaagcag
aaacaggacaactgcatggctactgttgatcaaaaagtgaccattgattgtccttggtcg
atttactccactattattgcattaacattctgcatacccttcaatgccaagcattccttg
ttgtcagctggcaaacggaaatatgtgcaagtctgtgtacagaatttgtcagaactctgt
ttccagctttcagactacagcctaaaaaattctgctgagtgtacagatttgcagctggta
cctctcaaccctgcatctcaacaggtcatgtacagtaagcaatcaatattctttgtatgg
gaattgaagtggacaaaagagcttcctctctccttgcagtgcctgttttcagtcagcttt
tgtccagctacctctgaagaacagtctcttatcttgaagccgttcacttacgaattccaa
gtggaaaatttttttacattgtaccatgtgaaaactgaaatcttcccacccttggatgca
gagtactgtaaaacaggctcactctgctccttagaggtgtccatcacccggcttgttgag
ctctctgaggttgacagagatgaagcattaacagaatcagatggatattgcacaacaaaa
cttatgtatgaagttgttgacaacagtagtaactgggcagtctgtggaaaaagctctgga
gtgatttctatgcctgtagcacctcgagcaactcacaaagtgcacatggaagtgatgcca
ctgtttgctgggcatctgcctttccctgatgtcagattgtttaaatacctccctcaccat
tctgctcactccatgcagcttgatgctgatagctggattgaaaacgataacctgtctgtg
gacaagaatgtggatgagcacgctgacagcagcagcatcaggagcagggggagcctgcat
tccacagccagcggggagcacaagggtctgcccatgccccggctccagcccttctccccg
ggccaggtcttcaacagcagcacagggatgcaaatcctggtcattcccagcaaggacgac
cacgttctggaggtcaacgtcacgtga
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integrated database retrieval system
