Geospiza fortis (medium ground-finch): 102036756
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Entry
102036756 CDS
T03755
Symbol
DDX4
Name
(RefSeq) DEAD-box helicase 4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102036756 (DDX4)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102036756 (DDX4)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102036756 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102036756
NCBI-ProteinID:
XP_005422079
UniProt:
A0A6I9HIJ7
LinkDB
All DBs
Position
Un
AA seq
741 aa
AA seq
DB search
MEEDWNAEIGDEALLTSLEKVSLLERPNDTSPVFNSSVDSFGTDEFVNSQHQPVSSFDKG
RNFAAKGFQEGNEDDAIPQNTGFKGFGQGFQERNAVDGASTQNRGFEGFHGGFGQGFQAG
NGEDAVTQNRGFKGFRGAFGRGFQERNAVDGASTQNRRFKGFRGGFGQGPKDGQRGIPES
GTLSFRERGTPADGFQEGNEEDAIPQNTGFKGFGQGFQERNAVDGASTQNRGFKGFHGGF
GQGGRGRQRDIPQSGTRDSRERGIHTDDAGPKVTYVPPSPPDDEQGIFAHYQTGMNFDKY
DENVVEVSGLDPPAALMSFADTNMCHTLTVNIAKAGYSKPTPVQKYSIPIILAGRDLMAC
AQTGSGKTAAFLVPVVAQMMRDGVTASSFKEQQEPECIITAPTRELIVQIFREARKFVYG
TCIRPVVVYGGTQTDYSIRQVKQGCNILCATPGRLLDIIGRGKIGLHNVKYLVLDEADRM
LDMGFGADMKKLVSFPDMPQKEKRQTLMFSATFPEEVQRLACEFLKTDFLFVVVGRAGGA
CSDVQQNILQVSRYFKRDKLIEILHSIGNERALVFVDTKKKADFIACFLCQENIPATSIH
GDREQREREIALWDFRSGKCPVLVATSVAARGLDIENVQHVINFDLPSTIEEYVHRIGRT
GRCGNTGKAVSFFDNNSDGHLAQPLIKVLSDEVPVWLTEVAFETEGGQLPVNTQKNYRGR
GNMNAREVKMDCSAREVESWD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagactggaatgcggagataggggatgaggcgttactcacatcccttgagaag
gttagcttgcttgagagaccaaatgacacctcgcctgtctttaattcaagtgtggactca
tttggtactgatgaatttgtgaactcacagcatcagccagtgagtagttttgataaagga
agaaattttgcagccaaaggttttcaagaaggaaatgaagacgatgccattccacaaaac
acagggtttaaaggatttggacaaggttttcaagaacgcaatgctgtagatggtgctagt
acacaaaacagagggtttgaaggatttcatggtggctttggacaaggttttcaagcagga
aatggagaagatgctgttacacaaaaccgagggtttaaaggatttcgtggtgcctttgga
cgtggttttcaagaacgcaacgctgtagatggtgctagtacacaaaacagaaggtttaaa
ggatttcgtggtggctttggacaaggtcccaaagatggacaaagaggtatacctgagtct
ggaactctcagctttagagagagaggaactcctgcagatggttttcaagaaggaaatgaa
gaagatgccattccacaaaacacagggtttaaaggatttggacaaggttttcaagaacgc
aatgctgtagatggtgctagtacacaaaacagagggtttaaaggatttcatggtggcttt
ggacaaggtggtagaggtaggcaaagggacatacctcagtctggaactcgtgattctaga
gaaagaggaatacacacagatgatgcgggtccaaaggtgacttatgtgcccccttctcca
cctgatgatgaacaaggcatctttgcacattaccagacaggaatgaattttgacaagtat
gatgaaaacgttgttgaagtgtcaggactggaccctccagcagcattaatgagttttgca
gacactaacatgtgtcatactttaactgtgaacattgctaaagctgggtactctaaacct
actccagtgcagaagtacagcattcctattatactggcgggacgggatttaatggcatgt
gcccagacaggatcaggaaaaactgcagcatttcttgtaccagttgtggcccaaatgatg
agggatggtgtaactgccagtagctttaaagagcagcaagaaccggaatgtattattact
gctccaactagagaactgatagttcagatcttccgagaagcaagaaaattcgtgtatgga
acttgtataaggcctgttgtggtctatggaggtacacaaacagactattcgattcgtcag
gtaaagcaaggctgtaatatactgtgtgccactccaggaaggcttctagacatcattgga
agaggaaagattggtttgcataatgtgaaatatttggtgctagatgaagcagaccgcatg
cttgatatgggttttggtgcagatatgaagaagttggtatctttcccagacatgccgcaa
aaagagaaacgccaaacactaatgtttagtgccactttccctgaagaagttcagaggcta
gcttgtgaatttttgaaaactgattttttatttgttgttgttggacgtgcgggtggagcg
tgcagtgatgttcagcaaaatattcttcaagtttctcggtatttcaagagggataaactg
atagaaattctacacagcataggtaatgaacgagctctggtctttgtggacacaaagaaa
aaagcagacttcattgcatgctttctttgtcaagaaaatataccagccactagtatccat
ggagatagagaacagagagaaagagaaatagcactttgggattttcgttctggaaaatgt
ccagttcttgtggcaacctcagtggcagcaagaggtctggacattgaaaatgttcagcat
gtcattaattttgatcttccttccaccattgaagagtatgtacaccgaattgggcgaact
ggtcgttgtggaaatacagggaaagcggttagcttctttgataacaattcagatggtcat
cttgcacaacctctaattaaagtgctttcagatgaagttcctgtttggttgacagaagtt
gcttttgagactgaaggagggcaactcccagttaatacccaaaagaattacagaggcaga
ggcaacatgaatgcaagagaagtaaagatggactgttctgcaagagaagttgagtcatgg
gattaa
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