Geospiza fortis (medium ground-finch): 102036916
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Entry
102036916 CDS
T03755
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102036916 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102036916 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102036916 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
LIM
Motif
Other DBs
NCBI-GeneID:
102036916
NCBI-ProteinID:
XP_014165398
UniProt:
A0A6I9ZB90
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All DBs
Position
Un
AA seq
267 aa
AA seq
DB search
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQEIKHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVETKTSLGALEPIKPLDQHN
QTPGSIAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVG
EQIYCEKHARERVIPPEGYEVVTVFPK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacacaccttgaggcacaaaacaaaatcaagggctgcacagatgaactgaccctgaca
gtcagcagaacggaggcaaaagtctggtcaccacttgtaagtgaggagggaaagacacat
ccctataagatgaatctggcctctgagccacaggaaataaagcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagacaaaaacatcactcggggccctggagcctatcaagcctttagatcagcataac
cagaccccaggcagcattgccatagacagacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctactaaaccatctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtagggatgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgcggcaccaacctcaagcagaaaggacacttctttgtggga
gagcagatctactgcgagaagcacgcgcgggaacgggtgattcccccagagggctatgag
gtggtcaccgtcttcccaaagtaa
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