KEGG   Geospiza fortis (medium ground-finch): 102036916
Entry
102036916         CDS       T03755                                 
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102036916 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gfr04990]
    102036916 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:gfr04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   102036916 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 LIM
Other DBs
NCBI-GeneID: 102036916
NCBI-ProteinID: XP_014165398
UniProt: A0A6I9ZB90
LinkDB
Position
Un
AA seq 267 aa
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQEIKHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVETKTSLGALEPIKPLDQHN
QTPGSIAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVG
EQIYCEKHARERVIPPEGYEVVTVFPK
NT seq 804 nt   +upstreamnt  +downstreamnt
atgacacaccttgaggcacaaaacaaaatcaagggctgcacagatgaactgaccctgaca
gtcagcagaacggaggcaaaagtctggtcaccacttgtaagtgaggagggaaagacacat
ccctataagatgaatctggcctctgagccacaggaaataaagcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagacaaaaacatcactcggggccctggagcctatcaagcctttagatcagcataac
cagaccccaggcagcattgccatagacagacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtctgcttcatttcttgtgttgcaagagatc
ttggagtcagaggagaaaggagaccctactaaaccatctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtagggatgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgcggcaccaacctcaagcagaaaggacacttctttgtggga
gagcagatctactgcgagaagcacgcgcgggaacgggtgattcccccagagggctatgag
gtggtcaccgtcttcccaaagtaa

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