Geospiza fortis (medium ground-finch): 102036943
Help
Entry
102036943 CDS
T03755
Symbol
TDRD12
Name
(RefSeq) tudor domain containing 12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102036943 (TDRD12)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102036943 (TDRD12)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102036943 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
102036943
NCBI-ProteinID:
XP_005426303
UniProt:
A0A6I9HQ91
LinkDB
All DBs
Position
Un
AA seq
1248 aa
AA seq
DB search
MEVAVLKAEDPSCFWIAVKESVPGVVGETVYENLNAEMEQFYNCYKDADEVKQEKIKKGQ
VYVVFNEELKCWCRALVESVWCQADGYQLSCFLVDYAKYCYVPSESLRVLPGAFAKIPHR
AKKCRLHCTKPLTLRIDYCENTAKIGPAKRWDTAAIQHFRKLLEEATEVKATIQTVEDKV
LEVFLFVTVKDEKICVNDDLVAKHFAHYKEDEGTAGSSSDVSDDEVSLNAECVPVEFVGP
TFLARPKRPFGEEVSPHLGPGLAGCNSVLKEPSQRSHTDLNDNTVPVVSMVPGLPSKEDK
AVQTERIPQFLNSSFLQTHTVEDDQQSLQDTGKEKNFVFLSKQIKPSSVLETAPLFDGLK
KELALNKFSGPTFTQSYCWPPVAGGCDVIVISHEGNDPLLYIPPVLTLLQESDYQALPNM
NGPLALILCPGWKKAQLVFDLLKTYRKGCRHLHPMLITLGQNKEAASQMEIRGCEVVVTT
PYNLLRLLEHNPRLLCRLCHLVLDEIEVLFSDTSEQVFTILDCYKKATARAQGNLPHQII
SVGTQWNKHVTPLIKEFMNDPHIVITVIEEAAIFGNVQQMVQPCINSNRTAELLKILDFT
QKNLQKVVVFTDSVTEVEMIHKALKSNSIVSLKKHKESKCNAECVLERWRKMHSSGTPAV
LVLTDDCLHSLGITDATWVIHFSFPSPAVFGQRLQSMSDNFCPGIKDSAVDQEDTKAKSV
ILLTENSSCHAPEVFYYLKRAEAEIPEELYDLTARVQESEEDEKFSRPLCASLKTFGICR
NRTECPDRHQINLSIDTAQNVAAEMIETPERVTILPLFIVHATKYFGRIVRKQNDQYTAL
AKEMNDYFKVPGHRISVNTVEKSVFYGLREGAICHRIQVVETPGKDEENAYKVTIKYIDE
GRTSQVNSDQLLHLPVKFQSLPPQAVEIIVCRVKPIDNEVEWNPKVTDHINHKIKGKVHH
AKVVQTLGKTVWVDPMVGVTHLPTMRMWINEYNIRSEILSTGLGTDNPEHVGEIQKLCTQ
IPAVDHGQSLEPLPAKPETTVGKLGNSIQTLLIRSPKEDTADLEEVSSPQDPSIQENSAE
SCNSPVTPTSNGVVQTKEAEDSTVHQQKGCHPSIKWFQDDVSVTLKVQILRATDCRCEFC
REKVIFSAYSEGKLYVADLELYQSVIAEKSTCVIKDTEAVILLVKEKKGTWCKLLKNKNV
HVSLDFESWEESEDERPFTVGSGKLNYPPAGSEEWFESSEDSDTESDE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgccgtattaaaggctgaggatccaagttgcttttggattgctgtgaaagaa
tctgtgcccggtgtagttggagaaactgtatatgaaaacctgaatgctgaaatggaacag
ttttataactgctataaagatgcagatgaagtaaaacaagagaagataaaaaaaggccag
gtttatgtggttttcaatgaggagctgaagtgctggtgcagggctctggtggagtcagtg
tggtgccaggcagatggttaccagctcagctgtttccttgtggattatgccaagtactgc
tatgttccgtcagagagcctacgagttttaccaggagcatttgcaaagatcccacacaga
gcaaagaagtgtcggctgcactgcacaaagccactgacactgcgtattgactactgtgaa
aacactgccaaaataggaccagccaaaagatgggatactgctgccattcagcattttcga
aagcttcttgaagaggctaccgaggttaaagccacaatacagacagtagaagataaagtg
ttagaggtgtttctttttgtgactgtaaaagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcattacaaggaagatgaagggactgcagggagttcctcagat
gtttctgacgatgaggtgtccttaaatgctgagtgtgttccggtggagtttgttggtcct
acgtttcttgccaggccaaaacggccctttggggaggaggtgtcaccacatcttgggcca
ggtcttgctggttgtaattctgttcttaaagagccatcccaaaggtcacacacagatcta
aatgacaatactgtgcctgtggtcagcatggtgccaggtttgccttccaaggaagataaa
gcagttcaaacagagaggattccacagttcttaaattccagtttccttcagacacacaca
gttgaagatgaccaacagagtttacaagatactgggaaagaaaaaaactttgtgttcctg
agcaagcaaattaaaccatcatcagttttggaaacagcaccactttttgatggtctgaaa
aaggaacttgctttgaacaagttttcaggccctaccttcacccagtcctactgttggcca
ccagtcgctgggggatgtgatgtcattgtcatctcccatgagggaaatgatcccttatta
tatattccaccagttcttacacttttgcaggaaagtgactaccaagccttgccaaacatg
aatgggccactagcactgattttatgtcctggatggaagaaggcacagcttgtttttgac
ctgctgaaaacatacaggaagggctgcagacaccttcatccaatgctgataacccttggg
cagaacaaggaagcagccagccaaatggaaatccgaggctgtgaagtagtagtgactaca
ccatacaacctcctgagactgctggaacataaccctcggctcttgtgtaggctttgccat
cttgttcttgatgagattgaggtgctgttctctgacacttctgaacaggtgtttactata
ctggattgttacaagaaggccactgctcgggcacaggggaatctaccacatcagatcatt
tctgtgggaactcagtggaataaacacgtcacacccttgataaaggagttcatgaatgat
cctcacattgtgataactgttattgaagaagctgccatctttggaaatgtgcaacagatg
gtgcagccctgcataaacagcaacagaactgctgagttactcaaaatcctggattttacc
cagaagaatcttcagaaagtagtggtcttcactgactcagtaactgaagtagagatgatt
cataaggccttgaagagcaactcaatagtttccttgaaaaagcataaagagagcaagtgt
aatgctgagtgtgtcttggagaggtggagaaaaatgcacagttctggcactcctgctgtg
ttagttttaacagatgactgcctgcactccttgggaatcacagatgcaacttgggtgatc
catttcagtttcccatctccagcagtcttcgggcagcgcctgcaaagcatgagtgacaac
ttctgccctggcataaaggattctgctgtagatcaggaagatacaaaggcaaagtcagtc
attctgctgacagagaacagttcctgtcatgcacctgaggttttttactatttaaagcgt
gcagaagctgaaattccagaggaactctatgatttgactgccagggtgcaggaatcggag
gaagacgagaaattttcaagacctttgtgtgcttctcttaaaacatttgggatttgcagg
aacagaacagagtgtccagatcgtcatcaaattaatttatcaatagacacagcccagaat
gtggcagctgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcttcattgta
catgcaacaaagtactttggtcgaatagtcaggaaacaaaatgaccaatatacagctctt
gctaaagaaatgaatgattacttcaaggtaccaggacataggatttctgtgaacactgtg
gagaagtcagtgttctatgggttacgtgagggagccatttgccacaggattcaggtggta
gagactccaggaaaagatgaagaaaatgcttataaggtcacaattaaatacatagacgaa
ggcaggacaagtcaagtgaatagtgatcagctgcttcacttacctgtgaagtttcagagt
ctgccacctcaggctgtggaaattatagtttgtagagtaaaacccatagataatgaagtt
gaatggaatccaaaggtgaccgatcacatcaatcacaaaattaaaggaaaagttcatcat
gcaaaagtggtgcaaaccttgggaaagacagtttgggttgacccaatggttggggttacc
catcttcccacgatgaggatgtggatcaatgagtacaacattcggtctgagattctgtca
acgggtttgggaactgacaatcctgaacatgtaggagaaattcagaagctgtgcacacag
ataccagctgtggatcatggacagagcttggagcctttacctgctaagcctgagactacg
gttggaaaattgggaaattcaatacagactttgttaataagaagcccaaaagaggacaca
gctgatctagaggaagtgtccagtccacaggatccatcaatacaggaaaattctgctgaa
agctgtaacagtcctgtgactcctacaagcaatggtgtagttcaaacaaaagaagcagaa
gactctactgtgcatcagcagaagggctgtcatccatcaatcaagtggtttcaagatgat
gtgagtgtgacactgaaggtacaaatactgagagcaactgactgtagatgtgagttctgt
agagaaaaggtgattttcagtgcttattcagaaggcaaactttatgtggctgacctggag
ctgtatcagtcagtaattgcagagaagtccacatgtgtgattaaggatacagaggctgtg
attttattggtaaaagagaagaaaggaacatggtgcaaattactgaagaacaagaatgtt
catgtgtccttagattttgaaagctgggaagagtctgaagatgaaaggccttttacagtt
ggttctggaaaactgaactaccctcctgcaggatctgaggagtggtttgagtcctcagaa
gacagtgatacagaaagtgatgagtaa
DBGET
integrated database retrieval system
