Geospiza fortis (medium ground-finch): 102037060
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Entry
102037060 CDS
T03755
Symbol
ABCA3
Name
(RefSeq) ATP binding cassette subfamily A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102037060 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102037060 (ABCA3)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102037060 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_22
DrrA1-3_C
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
102037060
NCBI-ProteinID:
XP_005425290
LinkDB
All DBs
Position
Un
AA seq
1676 aa
AA seq
DB search
MVLLRQFRLLLWKNYILQKRQILVTLIEVCLPLLFAAILIALRHRVHSVSHPNATLYPSQ
SVDDLPSFFSSQHASNPWELAYVPSNSSAVRSIAEAVERALPINIRAQGFPSERDFEEYV
RLDNRSGSVLAAVVFRHRFPHSSAPLPLQVEYELRFKYSGPREAKFADGGTPGYLREGFL
AVQHAVDRAIMQYHAGASSASLLENITVVVQRFPFPAYVNDLFLLAIQNQLPLLLMLSFT
YTSLNIVRAVVHEKEKKLKEYMHMMGLSNWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVS
EQGAVLTNSDPTLVFTFLAIFSISSISFNFMVSTFFSRANVAAAAGGFLYFFSYIPYFFI
SPRYDLMSHSQKLASCLISNVAMAMGAQLIGMFEGKGTGIQWRDLMKPVSVDDNFTLAQV
LGMLLLDSVLYGVVAWYVEAVFPGEYGVPQPWYFFLTPSYWCGRPRTVVGKEKEEEEDPE
KALKSQYIEEEPADLVSGIKIKHLSKVFKVGNKTKEAVKDLTVNMYEGQITVLLGHNGAG
KTTTLSMLTGLHSPTGGQAYINGYEISQDMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYA
GLKGYPASKCPEEISHILRILGLEDKRRSLSKALSGGMKRKLSIGIALIGDSKVVMLDEP
TSGMDPASRRATWDLLQQQRSNRTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLK
RKYGAGYHMVMVKEPYCNLGEISRLICQYVPNATMESNAGAELSFILPKESTHRFEALFT
ELEQRREELGIASYGASVTTMEEVFLRVGKLVDSSMDIQAIQLPALQYQHERRSNDWAMD
DSSSLSGMTDMTDDSGALITEDCSSIKLNTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQ
FLVPLIFTAFALIVAKTFPGPRDSSQLRLTLEPYGQTIVPFSVSGAAGLPQRLAEQYTEL
LDAQHQSPLEVLGGLEEYLISRASEEGGAFNEHYIAAASFEAAGNRTLVTALFNNQAYHS
PATALMLADSAILRVLAGPNASIIVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYGMA
SLASTFALLLVSERAIKAKHVQFVSGVYVVNFWLSALLWDIINFLIPCALMLVIFQAFNV
QAFTQDSHLVDVMLIFLLYGWAIIPLMYLLSFFFSVAATAYTRLTIFNILSGTATFLAVT
IMSIPELGLVDLSKTLDKVFLILPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAFNI
SYQMNYFSWETPGIGRYLTSLAIQGFSFLFLLFLIETNLLWRLRTLVCGICRRRKWVALL
NRVSMLPEDRDVADERKKVLESPPELLSSLSSPLVIKELTKVYDSRESLLAVDRISLAVS
KGECFGLLGFNGAGKTTTFKMLTGDESITSGDAFVDGHSILANIKKVQQRIGYCPQFDAL
LEHMTGRETLSMYARLRGIPERYIGSCVENMLRGLLLEPHADKLIRTYSGGNKRKLSAGI
ALIGGPPVIFLDEPSTGMDPVARRLLWDAVTRTRECGKSIIFTSHSMEECEALCTRLAIM
VNGQFKCLGSPQHLKSKFGSGYTLLAKTRSEEEGELQAFKAFVEKTFPGSVLKHEHQGMV
HYHLTNKNLSWAQVFGALEKAKEKYRLEDYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggttctgctcaggcagttcaggctgctgctctggaagaactacatcctgcagaagagg
cagatcctggtgacgctgatcgaggtgtgcctgccgctgctcttcgccgccatcctgatc
gcgctgcggcaccgcgtgcactccgtcagccaccccaacgccaccctctaccccagccag
tctgtggatgacctgcccagcttcttctcctcccagcatgccagcaacccctgggagctg
gcctatgtcccctccaacagcagcgccgtccggagcatcgccgaggcagtggagagagct
ctgcccatcaacatcagagctcagggcttcccctcggagcgggactttgaggagtacgtc
aggctggacaaccgctcgggcagcgtcctggccgccgtcgtgttccggcaccgcttcccg
cacagctcggccccgctgcccctccaggtggagtatgagctgcgcttcaagtacagcggg
ccccgcgaggccaagtttgctgatgggggcacaccaggttatctccgggagggattcctg
gcggtgcagcacgcggtggacagagctatcatgcagtaccacgccggtgccagctctgcc
agcctgctggagaacatcaccgtggtggtgcagcgcttccccttcccagcctacgtcaat
gacctcttcctcctggccatccagaaccagctgcccctgctgctcatgctcagcttcacc
tacacctcgctcaacatcgtccgcgccgtcgtccacgagaaggagaagaagctgaaggag
tacatgcacatgatgggcctcagcaactggttgcactggagtgcctggttcctcatgttc
ttcctcttcctcctggtgtccgtgttcttcgtcaccgtgctcttctgtgtcaaggtgagc
gaacagggagcagtgctcaccaacagtgaccccaccctggtgttcaccttcctcgccatc
ttctccatctcctccatctccttcaacttcatggtgagcaccttcttctcacgagcaaac
gttgcagccgccgctggcggcttcctctacttcttctcctacatcccctacttcttcatc
tcgccccgctacgacctgatgtcccacagccagaagctggcatcctgcctcatctccaac
gtggccatggccatgggggcgcagctcatcggcatgtttgaagggaaagggactggcatc
cagtggagggacctcatgaagcctgtcagcgtggatgacaacttcaccttggcccaggtg
ctggggatgctgctcctggactcggtgctgtatggtgtggtggcctggtacgtggaggct
gtgttccctggcgagtacggtgtgccacagccctggtacttcttcctcacgccctcgtac
tggtgtgggcggcccaggactgttgtggggaaagagaaagaggaggaggaggaccccgag
aaagccctgaagagtcagtacattgaggaggaaccagctgacctcgtgtcaggcatcaaa
ataaagcacctgtccaaggtcttcaaagtgggaaacaagacaaaagaggcagtgaaggac
ttgacagtgaacatgtacgaggggcagatcactgtcctgttgggacacaatggtgctggg
aagaccaccactctgtccatgctcacaggtctgcactccccgacgggcgggcaggcctac
atcaacggctacgagatctcccaggacatggtcctgatccgccgcagcctggggctgtgc
ccccagcacgacgtcctcttcgacaacatgacagtggaagagcacctgcacttctatgca
gggctgaagggatacccagcctccaagtgtcctgaggagatcagccacatcctgaggatc
cttggcttggaggacaagcgccgctccctgagcaaggctctctccgggggcatgaagcgc
aagctgtccatcggcatcgccctcatcggggactccaaggtggtgatgctggatgagcca
acgtcagggatggacccagcctcccgcagagccacgtgggatcttctgcagcagcagagg
agcaacagaaccatcctgctgaccactcacttcatggacgaggcagacctgctgggggac
cgcatagccatcatggccaagggcgagctgcagtgctgcggctcctcgctcttcctcaag
cgcaaatatggggctggatatcacatggtgatggtgaaggagccctactgcaacctggga
gagatctcccgcctcatctgccagtacgtgcccaatgccaccatggagagcaacgccggg
gcagagctgtccttcatcctgcccaaggagagcacccacaggtttgaggccctgttcacg
gagctggagcagaggcgggaggagctgggcatcgccagctacggcgcctcggtcaccacc
atggaggaggtgttcctcagggttgggaagcttgtggactccagcatggatatccaggcc
atccagctgcctgctctgcagtaccagcacgagagacgctccaacgactgggcaatggat
gactccagcagcctgagtggcatgacggacatgacagatgacagcggggcgctcattact
gaggactgctccagcatcaagctcaacaccgggttctacctgtgctgccagcagttctac
gccatgttcatgaagcgggccatgtacagctggcgcaactggaagatggtggcggcgcag
ttcctcgtgcctctgatcttcactgcctttgccctcatcgtggccaagaccttcccgggc
ccgcgggactcgtcccagctgcggctgacgctggagccctacggccagaccatcgtgcct
ttctcggtgtcgggcgctgcggggctgccgcagaggctggcggagcagtacacggagctg
ctggatgcccagcatcagtcgccactggaggtgctgggtgggctggaggagtacctcatc
tcccgagcctccgaggaaggaggagccttcaacgagcactacattgcagccgcctccttc
gaggccgcagggaaccgcacgctggtcacggcgctcttcaacaaccaggcctaccactcc
ccggccaccgccctcatgctggctgacagcgccatcctcagggtgctggcaggccccaac
gcctccatcatcgtcaccaactacccccagccccgcaacatcaccgagaaggccaaggac
cagctcatggaaggccagactggctttgccattgccatcaacctgctgtatgggatggcc
tctctcgccagcacctttgcgctgctgctggtcagcgaacgcgccatcaaggccaagcac
gtccagttcgtcagtggcgtgtacgtggtcaacttctggctttctgccctgctctgggac
atcatcaacttcctcatcccttgtgctctgatgttggtgatattccaagccttcaacgtg
caagccttcacccaagacagccacctcgttgacgtgatgctgatcttcctcctttatggc
tgggccatcatccccctcatgtacctcctcagcttcttcttctcggtggcagccacggcc
tacacccgtctgaccatcttcaacatcctctccggcaccgccaccttcctcgccgtcacc
atcatgagcatcccagagctgggcttggtggacctctccaaaaccctggataaagttttt
ctcatcttacccaattactgcttgggccagtgcatcagtgacttctaccagaactacgag
ttcattcagttctgcacctcctctgttgaagccatcttcatctgcaaggccttcaatatc
agttatcagatgaactacttttcctgggagacccctgggattgggcggtacctgacctcc
ttggccatccagggtttctccttcctcttcctcctcttcctcattgagacaaaccttctc
tggaggctgagaactctggtctgtggcatctgcaggcggcggaaatgggtggcgctgctg
aacagggtgtctatgctgccagaggacagggacgtggcagatgagaggaagaaggttttg
gagtcaccaccagaactgctgtcgtctctcagcagccctctggtcatcaaggagctgacc
aaggtctacgacagccgggagtctctgctggcagtggacaggatctccttggctgtcagc
aaaggggaatgctttggtctccttggcttcaacggagcgggcaaaaccaccaccttcaag
atgctgacaggtgacgagagcatcacatcgggggacgcctttgtggatggccacagcatt
ctggccaacatcaagaaggtgcagcagcggatcgggtactgcccgcagtttgacgccctg
ctggagcacatgacgggccgcgagacgctgagcatgtacgcgcggctgcgcggcatcccc
gagcgctacatcggcagctgcgtggagaacatgctgcgggggctgctcctggagccgcac
gccgacaagctcatcaggacctacagcggtgggaacaagcggaagctgagtgctggcatt
gccctcattggtggcccccctgtgatcttcctggacgagccctccactggcatggacccc
gtggcccggcgcttgctctgggatgcagtgacacggacacgggagtgtggcaaatccatc
atcttcacctcccacagcatggaggagtgcgaggcactgtgcacacgactggccatcatg
gtgaatgggcagttcaagtgcctgggcagcccccagcacctcaaaagcaagtttggtagt
ggatacaccttgctggccaaaacccggagcgaggaggagggtgagctgcaggccttcaag
gccttcgtggagaagactttcccaggcagtgtcctgaagcatgagcaccagggcatggtg
cattaccacttgaccaacaagaacctcagctgggcacaggtctttggggccctggagaaa
gccaaagagaagtatcgcttggaggactactcggtgagccagatctccctggagcaggtc
ttcatgagcttcactcgcttccagcactacacagaggacagagggaagtga
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integrated database retrieval system
