Geospiza fortis (medium ground-finch): 102037171
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Entry
102037171 CDS
T03755
Symbol
ABCA7
Name
(RefSeq) ATP binding cassette subfamily A member 7
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
gfr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102037171 (ABCA7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102037171 (ABCA7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102037171 (ABCA7)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102037171 (ABCA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
102037171
NCBI-ProteinID:
XP_014165627
LinkDB
All DBs
Position
Un
AA seq
1939 aa
AA seq
DB search
MAVGTQLGLLLWKNFTYRRRQRIQLAIEILWPLFLFLILISVRRSHPPFKQHECHFPNKA
LPSAGTLPWLQGIICNMNNPCFRHPTAGEAPGVVGNFDGSIFLRDAASLMEEVSSMSCLA
ELRQEIAGLRAPNSSTGAFRALSRIACGHPEGGGLRIPSLNWYEDNDVKAFLDRNSSEHR
PVASGSTSPWAPPPGPAPDSVMAEVNRTFRELAVLGELGGAWQELGPRIYTLLNSSLEMQ
VLQDLLLAPSTAQLLDGFLNGTSWKLPELVTFLTGPAGGPGLTWHQVYADVDAVLSTLSQ
FMECVCLDKIEAVATEEQLVARALELLEEQQFWAAVVFQPPINATAPGLPPHVRYKIRMD
IDDVTRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYIQDLVEQAVVRVHTGAAPRTGVYV
QQMPYPCYVDDVFLRVLTRSLPLFMTLAWIYSVAMIIKGVVHEKETRLKETMKTMGLSSG
ILWLSWFLSSFIPFLLSSALLVLILKLGNILPYSDPAVIFLFLGTFSVATISQCFLISTF
FPRANLASACGGIIYFSLYLPYVLCVAWRDYITFPLRVLVSLLSPVAFGFGCDYFSLYEE
QGVGIQWHNLAASPVPGDPYSFAAAMGLLLLDAVLYGLATWYIEGVFPGQYGIPKPWNFP
FLKSYWFGESSSSGHSLYHSSSHTAPQVLVEEPPADLQPGVSIRNLVKVYGSSGRAAVNG
LSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYILGWDIRSDIDSIRKSMGMC
PQHNVLFDILTVEEHVWFYGRLKGLSEQQVQLEXXXXGPDPPQRRPSAGGMQRKLSVAIA
FVGGSRVVILDEPTAGVDPFSRRSIWELLLKYRKGRTIILSTHYMDEAELLGDRTAIISQ
GRLCCCGSPLFLKARLGTGYHLTLVKRDRGGTGGSTGTECKTISYLQEDGSDSEHSSDTG
LGSERGSDASAVDVAQLSALIQKLVPGSRLVEDIGHEVLFVLPYSGARDGAFGELFRELD
ARLGELGVSSYGISDTTLEEIFLKVAEDTALDADTTGKTPQSWLELSSGRMLHARRGTRG
FLAQIVLPAVFVCIALLFSLIVPPFGRYPPLQLQPWMYGQQFTFFSNDAPGDPDTARLLE
ALLAEPGFGTKCMKEEGKGPSVHPXQVQRGTGDILQNLTGRNISDYLVKTYPQIIRQELR
NKKWVNEQRYGGFSLGAGSSQALPSAAEVDQAVLELRVLLNITLVRLDSAPGSALGVPVL
GDPSSPCPALPILQVWFNNKGWHAMVSFLNVASNGLLRARLPPGTDPARFGITATNHPLN
LTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVVFLIEERVSKAKHLQFVSGMKPIT
YWLGNFAWDMCNYLVPALLVILIFLCFXXXXXMCTSARPCCAPCRWSITPLMYPASFLFS
IPSTAYVALTCINLFIGINGSVATFVLELFVDQNLNDINRVLKKVFLIFPHFCLGRGLID
MVKNQAMADAFERFGDKRFVSPLSWELAGKNMFAMAIEGIVFFLFTLLLQYHRFFLRLGP
RALELPSLGDEDQDVARERARVASIPPHGHLLLLKDLTKVYRRRKAPAVDRLCVAIPPGE
CFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGYSVLTDLQSVHQHMGYCPQFDAITDL
LTGREHLEFYSRLRGIPEEETPRVAQWGITALGLAPHADRPAGKYSGGNKRKLSTAIALL
GCPPVVFLDEPTTGMDPQARRFLWERILGVIRDGRSVVLTSHSMEECEALCTRMAIMVNG
RFRCLGSVQHLKNRFGDGYTVVVRAGGPGPAAVQTLLQQHFPGIVLREQHGGLLQYHLPA
RVASLATVFSLLAAHRGPCHIEDYSVSQTTLDQVFMHFAQEQSDGDAGEVAAPGQDAAPS
PGRRLSRFLEDDSYQESAV
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgggcacccagctggggctgctgctctggaagaacttcacctaccgccggcgg
cagcggatccagctggctatcgagatcctgtggcccctcttcctcttccttatcttgatc
tcagtgcggcgatcccacccgcccttcaagcagcatgagtgccactttcccaacaaggcg
ctgccctccgcggggaccctgccctggctgcagggcatcatctgcaacatgaacaacccc
tgcttccgacaccccacggcgggagaggcccctggcgtggtgggaaacttcgacggctcc
atcttcctgcgggatgcagcatccctgatggaggaggtctcctccatgtcctgcctggcc
gagctgcgtcaggagattgcggggctgagggcccccaacagcagcacgggcgccttcaga
gccctgtcccgcattgcctgtggccaccccgagggcggggggctcaggatcccctccctc
aactggtacgaggacaacgatgtcaaagccttcctggacaggaacagctcggagcacaga
cccgtggcctcgggcagcaccagtccctgggcccccccaccggggccggcccccgacagt
gtcatggctgaggtgaaccgaaccttccgggagctggctgtgctgggggagttggggggt
gcctggcaggagctgggaccccgaatctacaccctcctcaacagcagcctggagatgcag
gtgctccaggacctgctgcttgccccgagcacagcccagctcctggacgggttcctcaac
ggcacctcctggaagctgccagagctggtcacattcctgacggggccagcagggggacca
ggcctcacctggcaccaggtgtacgctgatgtggacgcagtcctgagcacgctgtcacag
ttcatggagtgtgtctgcctggacaagatcgaggcagtggccaccgaggagcagctggta
gcccgagccctggagctgctggaggagcagcagttttgggcagcagtggtcttccagccc
cccatcaatgccacagcccccggcctgccaccccacgtccgctacaagatccgcatggac
atcgacgacgtcacgaggaccaacaagatcaaggacaggttttgggacccaggccctgca
gctgatcccttcagtgacctgcgctacgtctgggggggcttcgtgtacatccaggacctg
gtggagcaggcggtggtgagggtgcacactggggctgccccacggactggggtctacgtc
cagcagatgccctacccctgctacgtggatgatgtgttcttgagggtcctgacccgctcg
ctgcctctcttcatgactctggcctggatctactcagtggccatgatcatcaagggggtg
gtgcacgagaaggagacgcgtctcaaggagaccatgaagaccatggggctgagcagcggg
atcctctggctcagctggttcctcagcagcttcatccccttcctcctcagctctgccctc
cttgtcctcatcctcaagctgggaaacatcctgccctacagtgacccagcagtcatcttc
ctcttcctcggcaccttctcagtggccaccatcagccaatgcttcctcatcagcaccttc
ttcccccgtgccaacctggcctcggcgtgcggtggcatcatttacttctctctgtacctg
ccctacgtgctgtgcgtggcctggcgcgactacatcaccttcccactccgtgtccttgtg
agcctgctgtcccccgtggcctttggtttcggctgtgattacttctctctctacgaggag
cagggggtgggcatccagtggcacaacctggctgccagccccgtgccaggagacccgtac
agctttgctgcagccatggggctgctgctgctggatgctgtcctctatggcctggccacc
tggtacatcgagggtgtcttcccaggtcagtacgggatccccaagccctggaatttcccc
ttcctgaagagctactggtttggagagtcatcctcatctgggcattccctgtaccacagc
agctcccacactgcaccccaagtgctggtggaggagccacctgctgatctccagcccggc
gtctccatccgcaacctggtgaaggtctatggcagcagcggccgtgcggccgtcaacggg
ctgagcctggacttctacgaggggcagatcacatccttcctgggccacaacggcgctgga
aagaccaccaccatgtccatcctgactggcctcctgccccccacctcgggcactgcttat
atcctgggctgggacatccgctccgatatcgacagcatccgcaagtccatggggatgtgt
ccccagcacaacgtgctcttcgacatcctgacggtggaggagcacgtctggttctacggg
cggctgaaggggctctcggagcagcaggtgcagctggagannnnnnnnnntggcccggac
cccccccaacgccgtccctctgcaggcggcatgcagaggaagctctcggtggccatcgcc
ttcgtgggcggctcccgcgtggtgatcctggatgagcccacggccggcgtcgatcccttc
tcccgccgcagcatctgggagctgctgctcaagtaccgcaaaggtcgcaccatcatcctg
tccacccactacatggacgaggcggagctgctgggggaccgcactgccatcatctcccag
ggccggctctgctgctgtgggtctcccctcttcctcaaggccaggcttggcacgggctac
cacctcaccctggtgaagcgggacaggggagggacaggcggcagcaccggcaccgaatgc
aaaacaataagttatttacaggaagatggcagtgactcggagcacagcagtgacacaggc
ctgggcagcgagcggggcagtgatgccagcgctgtggatgtggcccagctgtcggcgctg
atccagaagctggtccctggctccaggctggtggaggacatcgggcacgaggtgctgttt
gtcctgccctacagcggggccagggatggggcctttggggagctgttccgtgagctggac
gcacgcctgggggagctgggggtctccagctacggcatctctgacaccactctggaagag
atattcctgaaggtggccgaggacacagcgctggacgctgacaccacaggtaaaacccct
cagtcctggctggagctgagctctgggaggatgctccacgctcggcgcggcacccgcggc
ttcttggcgcagatcgtcctccccgccgtgttcgtgtgcatcgcgctgctcttcagcctc
atcgtgccgcccttcgggaggtacccgccgctgcagctccagccctggatgtacgggcag
cagttcaccttcttcagcaacgatgccccgggagatcccgacacagcccggctgctggag
gcgctcctggctgagcccggcttcggcaccaagtgcatgaaggaagaggggaagggcccc
tctgtccatcccnnacaggtgcagaggggcacaggggacatcctgcagaacctgacgggc
aggaacatctctgactacctggtgaagacctatccccagatcatccgtcaggagctgagg
aacaagaagtgggtgaatgagcagaggtacggcggcttctccctgggtgctggcagctcc
caggccctgccatcagcagcagaggtggatcaggcagtgctggagctccgtgtgctgctc
aacatcaccctggtacggctggactcagcccctggctcagctctgggggtcccagtgctg
ggagacccctcctcaccctgcccggccctccccatcctgcaggtttggttcaacaacaag
ggctggcacgccatggtttccttcctcaacgtggccagcaatgggctgctgcgagcccgg
ctgccccccggcactgaccccgcacgtttcggcatcacggccaccaaccaccccctgaac
ctcaccaaggagcagctcagcgaggccgccctgatggccacctctgtggacgtgctggtc
tccatctgcgtgatctttgccatgtccttcgtcccggccagcttcgtcgtcttcctcatt
gaggagagggtcagcaaggccaagcaccttcagtttgtcagcgggatgaagcccatcacc
tactggctgggcaacttcgcctgggacatgtgcaactacctggtccccgcgctgctggtc
atcctcatcttcctctgcttcnnnnnnnnnnnnnggatgtgcacctcagccaggccctgc
tgtgccccctgcagatggtccatcactcccctgatgtatccagcctccttcctcttcagc
atccccagcactgcctacgtggccctgacctgcatcaacctcttcattggcatcaacggc
agtgtggccacctttgtgctggagctctttgtggaccagaacctcaatgacatcaaccgt
gtcctgaagaaggttttcctcatcttcccccacttctgcttgggccgaggcctcattgac
atggtgaagaaccaggcaatggctgatgcctttgagaggtttggggacaagcgcttcgtg
tcccccctctcctgggagctggcagggaagaacatgtttgccatggccatcgagggcatc
gtcttcttcctcttcaccctcctgctgcagtaccaccgcttcttcctgcgcctgggccca
cgggctctggagttgccctcgctaggagatgaggaccaggacgtggccagggagcgggcg
agggtggccagcatccccccacacggccacctcctgcttctgaaggacctgaccaaggtg
taccggcgcaggaaggctccggctgtggaccggctctgcgtggccatcccccccggggag
tgctttggcctcctgggggtgaacggtgctgggaaaacgtccaccttcaagatgctgaca
ggggacacggaggtgacgctgggcgaggcttggttgaaggggtacagcgtgctcaccgac
ctccagtctgtccaccagcacatgggttactgcccccagtttgacgccatcacggacctg
ctgacggggcgggagcacctggaattctacagccgcctgcgtggcatcccagaggaggag
acccccagggtggctcagtggggcatcaccgctctggggctggccccgcacgcggaccgg
ccggcgggcaagtacagcgggggcaacaaacgcaagctctccacggccatcgccctgctc
ggctgcccccccgttgttttcctggatgagcccacgacggggatggacccgcaagcccgg
cggttcctgtgggagcgaatcctcggcgtgatccgggacggacggtccgtggtgctcacg
tcccacagcatggaggagtgcgaggcgctctgcaccaggatggccatcatggtcaacggc
cggttccgctgcctgggcagcgtccagcacctcaagaacaggtttggggatgggtacacg
gtggtggtgagggcggggggccctggcccagcggcggtgcagaccctgctgcagcagcat
ttccccggcattgtgctgcgggagcagcacggggggctgctgcagtaccacctccctgcc
cgtgtcgcctccctggccaccgtcttcagcctcctggccgcccaccgtggcccctgccac
atagaggactactcagtgtcccagaccacgctggaccaggtcttcatgcactttgcccag
gagcagagcgatggggacgccggggaggtcgcagccccagggcaggatgcagcccccagc
cccgggaggaggctgagcaggttcctggaggatgacagctaccaggagagcgctgtctga
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integrated database retrieval system
