Geospiza fortis (medium ground-finch): 102037182 Help Entry 102037182         CDS       T03755                                  Symbol VPS16 Name (RefSeq) VPS16, CORVET/HOPS core subunit   KO K20180   vacuolar protein sorting-associated protein 16 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04140   Autophagy - animal gfr04148   Efferocytosis gfr05132   Salmonella infection Brite KEGG Orthology (KO) [BR:gfr00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102037182 (VPS16)    04148 Efferocytosis     102037182 (VPS16)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     102037182 (VPS16)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gfr04131]     102037182 (VPS16) Membrane trafficking [BR:gfr04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     102037182 (VPS16)    Hops complex     102037182 (VPS16) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps16_N Vps16_C Peptidase_M14 Motif Other DBs NCBI-GeneID:  102037182 NCBI-ProteinID:  XP_014166762 LinkDB All DBs Position Un AA seq 897 aa AA seqDB search GQPRSAPAGNPNKRRETCPPLGLESLRVLDEQLRASSHKRHGLGAHRGRLNIQGSELAGW AMGRWTYEGIDLNHNFADLNTALWDAEDNDLVPHEFPNHYIPIPEYYTFANATVRPQNIP VLSAAERRRCHYDDFTRYGNIINGANWHTVAGSMNDFSYLHTNCFEITVELSCDKFPHAS ELPAEWENNRESLLLFMEQVHRGIKGVVRDSDTELGIPNAIISGDGINHDVRTGIGTPGQ GEKPELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKAPSARPLLEIYSASGLLLA SVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSMGNEVLQNHVLEAQVFH TEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKAPLCWTVLAQDRVTMVLLAMGQ ELFLLDNTSCSVLEKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSEC IRYPLGTGDTPEALPPPLAPTLRIFSQSHRMLPDLSEASQEIFRIASMAPGALLLEAQKE YEKESQKADEYLREIREQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPP EGFVRMCQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDSVSPNPTMCPPVPSMSPCPL RIPLTHQLYTVVLHLKNELNRGSFFMTLQNQPVALSLYRQRIEGRVAALQNALDEFYKAK NDFAAKATEEQIKLLRLQLHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE QRVKAFVLVGDLEQAAEAAVERKNEAEMSLVLSRCSPGTDGALAERLNRARAQLLKK NT seq 2694 nt NT seq  +upstreamnt  +downstreamnt ggacagccccgctccgcgcccgcgggaaatcccaataaaaggagggaaacgtgtcccccc ctggggctggagtccctgcgcgtgctggacgagcagctgcgggcatcgagccacaagcgg cacgggctgggagcgcaccgcggccgcctcaacatccagggctcggagctggcgggatgg gccatgggccgctggacgtacgagggcatcgacctcaaccacaacttcgccgacctgaac acggcgctgtgggacgccgaggacaacgacctggtgccccacgagttccccaaccactac atccccatccccgagtactacaccttcgccaacgccacggtgagaccccaaaacatcccc gtcctatcagccgccgagcgccgccgctgccactacgacgacttcacgcgctacggcaac atcatcaacggcgccaactggcacacggtggctggcagcatgaacgacttcagctacctg cacaccaactgcttcgagatcaccgtggagctctcctgcgacaaattcccgcacgcctcc gagctgcccgccgagtgggagaacaaccgcgagtcgctgctgctcttcatggagcaggtg caccgggggatcaagggcgtggtccgggacagtgacaccgagctgggcatccccaacgcc atcatctccggggatggcatcaaccacgacgtccgcaccgggatcgggacaccgggacag ggagagaagccggagctctactccatggaatgggggctgcgggaggatctccgtgactgt gtggtggcagctgccccatatgggggtcccatagctctgctgaggaattcccggcgggac aaggcccccagcgcccgcccgctcctggagatctactcggcctcggggctgctcctggcc agtgtcccgtggaagagtggccacctggtgcacctgggctggacagcgggggaggacctg ctgtgcatccaggaggatgggactgtcctggtctacaacctgttctgcgagttcaaacgg cacttcagcatgggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccac acggagttcgggacgggcgtggccatcctgacgggagcgctgcgcttctccctcgccacc aacatcgacgacctcaagctgcgccgcctgcccgaggtccctgggctgcagaaggccccg ctgtgctggaccgtgctggcccaggacagggtgaccatggtgctgctggccatgggacag gagctcttcctgctggacaacacctcctgctccgtgctggagaaattctgcgagttcaac accggcatccgatccccgcccaagcagatggtttggtgcacgcggccccgcagccggcag cgcgccgtggtgctggcctgggagcggcagctcatggtggtgggaaactcctcggagtgc atccggtatcctttggggacaggggacactcccgaggcgctgccacctccgctggcaccc acactgcggatcttttcccaatcccataggatgctcccagatctctcagaggccagccag gagattttccgcatcgcctccatggccccgggcgctctgctgctggaggcacagaaggag tacgagaaggagagccagaaggccgacgagtacctgcgggagatccgcgagcagcagctg ctccccgaggccgtgggccagtgcatcgaggccgcgggctacgagcacgagcctgacacc cagaaatccctgctgagggcagcttcctttgggaagtgtttcctggataagttcccgccg gaggggttcgtgcgcatgtgccaggacctgcgggtcctcaacgccatcagggactaccag atcgggatcccgctcaccttcacccaatacaagcagctcaccatcgaggtgctgctggac agtgtgtcccccaaccccacaatgtgtccccctgtcccctccatgtctccctgtcccctc cgcatccctctgacccatcaattgtacaccgttgtgctgcacctcaagaacgagctcaac cgcggctccttcttcatgaccctacagaaccagcccgtggccctgagcctgtaccgccag cggatcgagggccgcgtggccgccctgcagaacgccctggacgagttctacaaggccaag aacgacttcgctgccaaggccacggaggagcagatcaagctgctgcggctgcagctgcac ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggcaacc ctcatcctggacgggcaccacaaacgcgctgagcagctctaccgggacttcaggatcccg gacaagaggtactggtggctgaagatcaacgccctggccacccgcggggactgggaggag atggagaagttctccaagagcaagaagtcgcccattgggtacctgcccttcgtggaggtg gccgtgaagcaccacaaccgctacgaggccaagaagtacgcgccgcgtgtgccgcccgag cagcgcgtcaaggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccgtg gagcgcaagaacgaggccgagatgagcctggtgctgtcccggtgctcccccggcaccgac ggcgccctggctgagcggctcaaccgggcccgggcacagctcctcaaaaagtga

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