KEGG   Geospiza fortis (medium ground-finch): 102037255
Entry
102037255         CDS       T03755                                 
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
  KO
K09444  interferon regulatory factor 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    102037255 (IRF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102037255 (IRF1)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    102037255 (IRF1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 102037255
NCBI-ProteinID: XP_005418733
UniProt: A0A6I9HE13
LinkDB
Position
Un
AA seq 317 aa
MPVSRMRMRPWLEMQIDSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKHQK
KERKSKSSREARNKSKRKCYEETRLKESAESLTNTPLPDDHSGYTIHDYAGQEVEVESTA
ITLDLSSCEVSGSLSDWRPPMEVTMADSTNDLYQLQVSPLASSSEVTDEDEEEINQDIFK
LLGPAQDWHSTSIGGKGFLTNESGTQSLCSTYGYKEQDGDIDTTSGEIDFRFYDQKNLDF
SWLDTVRPTMQVIPCGL
NT seq 954 nt   +upstreamnt  +downstreamnt
atgccggtgtcaagaatgcgcatgaggccgtggttggaaatgcagattgattccaatcaa
atacctggactgatatggattaacaaggataagaggatcttccaaatcccatggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttcaggagctgggccatt
cacacaggaaggtataaagaaggtgagaaagatcctgatccaaaaacctggaaggcaaat
ttccgctgtgccatgaattccctgcctgacattgaagaagtgaaggataaaagcatcaac
aagggctccagtgctgtcagggtttacaggatgctgccacccttgacaaagcaccagaag
aaagaaaggaagtcaaagtcttcaagagaggcaagaaacaagagcaagagaaagtgttat
gaagagacaaggctgaaagagtcagcagaaagcttaaccaacactcctctgccagatgac
cacagtggctacaccattcacgactatgcagggcaggaagtggaggtggagagcacagcc
atcaccttagacctgtcctcctgcgaggtgagcggctccctgagcgactggaggccacca
atggaggtgaccatggctgacagcaccaacgacctctaccagctccaggtgtctcccctg
gcttcctcctcagaggtcacagacgaagatgaagaggaaataaatcaggatatttttaag
ctgcttggaccagcccaagactggcacagcaccagcattgggggcaaaggctttctgacc
aacgagtcaggcacccagagcttgtgcagcacctacggatacaaggagcaggatggggac
attgacaccacatcaggagagatagatttcaggttctacgaccagaaaaacctagacttc
tcctggctggatacagtgaggccaaccatgcaagtcattccctgtggattgtaa

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