Geospiza fortis (medium ground-finch): 102037309
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Entry
102037309 CDS
T03755
Symbol
INO80
Name
(RefSeq) INO80 complex subunit
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102037309 (INO80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102037309 (INO80)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
102037309 (INO80)
INO80 complex (yeast)
102037309 (INO80)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102037309
NCBI-ProteinID:
XP_014161843
LinkDB
All DBs
Position
Un
AA seq
1541 aa
AA seq
DB search
MASELGAREDGSCSELAKPLYLQYLEKALQLDQFLRQTSAIFNRSISSDESEDGLDDNPL
LPQSGDPLMQVKEEPPDSLLGESSGAGNSGMLNTHSLNGVLQPEPKSEKGSLYNFSKLKK
SRKWLKSILLSDDSSDTDSPSDEDGEEEEEFSLSREELHDMLRLHKYKKLHQSKYSKDKE
LQQYQYYSAGLLSTYDPYYEQQRHLLGPKKKKFKEEKKIKGKLKKVKKKRRRDEELSSEE
SPRRHHHQTKVFAKFSHDTPPPGSKKKHLSIEQLNARRRKVWLSIVKKELPKAYKQKASA
RNLFLTNSKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRK
RAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDSGHDGIQEEILRKLE
DSSTQRQIDIGGGVVVNITQEDYDSNYYKAQALKNAEDAYQIHQARTRSFDEDAKESRAA
ALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGING
ILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFARFVPKFKVLPYW
GNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKS
SSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIES
HAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQALK
NKISIDDLLQSSMGTTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQ
ISKFLYRHGQIRVFNHSRDRWLRVLLSPFAPDHIQQSLFHRKGINEESCFSFLRFIDVSP
AEMANLMNQGHLARWLALFLSLKASYRLHHMRSWMETEEDKEQRSCFLRNRDFLLDVNFP
LNLHSCTLLQNLVFSSHCKAVTGYSDHVIYRRRSATSCVRCCQVTELPSFLCIASPRVTA
VPLEFYCNDRSAEYERRALREGGSLEAKQCVLHGSPELAADWLKQCSQFFPEHPGGLLGI
RPQNGWSFIRIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVY
RKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWN
PTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL
KPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRK
KENMNLVIPFVPSADNSNLSADGDDSFISVDSAMPSPFSEISISSELHMGSIPPDESSND
MLVIVDDPASSAPQSRATNSPASITGSVSDTVNGVSMQDTSLAARGQSSRSRGRPKGGSK
GGTGKGRSRKSIAGSAXAAYAAYGYNVSKGMSASSPLQTAIIRPSGLTDFGPSNASSPLS
SPLSKGNSICGTPKSLNLTSSLISETSIRKQSKGAHTSGGR
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagctgggtgccagggaggatggcagctgctcagagctggcaaaacccctc
tatctgcaatatctggaaaaagctctgcaactggatcagttcttacgacagacgtctgcc
atctttaacaggagtatatccagtgatgaaagtgaagatggattggatgacaatcctttg
ctgcctcagtctggggatcccctgatgcaagttaaggaagagcctccagactccttgctt
ggagagtcttctggagcagggaattctgggatgctgaacacacattccctgaatggagta
ctccagccagaaccaaagtctgaaaaagggagcttgtataatttttccaaactgaagaaa
agcagaaagtggctgaagagtatccttctgagtgatgattccagtgacacagattcacca
agtgatgaggatggagaggaggaagaagaattttctctttcaagggaagaacttcacgat
atgctgcgattacacaagtataaaaaattgcatcaaagtaaatatagcaaagacaaggag
ttgcagcagtaccagtactacagcgcggggctgctctctacctacgacccctactatgag
cagcagcgccacctgctagggcccaagaaaaagaagtttaaagaagagaaaaaaataaaa
ggcaagttgaaaaaagtgaagaaaaagaggagacgggatgaagaactctcttcagaggag
tcaccacgacgccaccatcaccagaccaaagtttttgccaagttttcccacgatacacct
ccacctgggtccaagaaaaagcatttgtctattgagcaacttaatgcacgtcggcgcaaa
gtgtggcttagcattgttaagaaggagttgccaaaggcatacaaacagaaagcttcagcc
cgtaacctcttcctaaccaacagcaaaaagctggcccaccagtgcatgagggaggtccgt
agagctgctatccaagcccagaaaaactgtaaggaaactctaccacgagcacgtcgtctc
accaaggagatgcttctctattggaaaaagtatgaaaaggtggaaaaagagcatcggaaa
cgagctgagaaggaggctctggagcaacgcaagctggatgaggagatgagagaggctaag
agacagcagcgaaaactgaactttctgatcacacaaactgaattatatgcccattttatg
agtcgtaaacgagatagtggacatgatgggatacaggaggaaatcctgcgcaaactggaa
gacagttctacccaaaggcagattgatattggtggaggagtagtggtcaacatcacccaa
gaagattatgatagcaactattacaaggcccaagctctgaagaatgctgaggatgcttac
cagattcatcaagcccggaccagatcatttgatgaagatgcaaaggagagccgggcagct
gctttacgggctgctaacaaatctgggactgggtttggagagagctacagtttagcaaac
ccatctatccgagcaggagaagatattccacagcctaccattttcaatggaaaactgaaa
ggttatcagctgaaaggcatgaattggctggccaacctatatgagcagggcatcaatgga
atcctggcagatgaaatgggtctgggtaaaacagtacaaagtattgctctccttgcacat
ctggctgagagagagaacatctggggaccttttttaataatttcacctgcctctactctg
aacaactggcaccaggagtttgccagatttgtacctaaatttaaggtgctaccttattgg
ggaaatccccatgatagaaaggtgatcagaaagttctggagtcagaagacattgtatact
caggacgctcctttccacgtggtaattaccagttaccagctggtagtgcaggatgtgaag
tatttccagcgagtgaagtggcagtatatggtgctggatgaagcacaagcactcaagagt
agctccagtgttcgttggaagatcctactacagttccagtgtcgaaacagattgttgttg
actgggaccccgatccagaacacaatggctgagctgtgggccctgctgcattttatcatg
ccaacactgtttgattcccatgaagagttcaatgagtggttttctaaggacatagagagc
catgcagagaacaaatctgctattgatgagaaccagctatcccgcttgcacatgatcctg
aagcccttcatgttgagaagaatcaagaaggatgtggaaaatgaactgtcagataagatt
gaaattcttatgtactgccagcagacaagtcgacagaagctcttgtaccaagctctgaaa
aacaaaatctctattgatgacctcttgcagtcatcaatgggcactactcagcaagcacag
accaccactagtagtctgatgaatctagttatgcagtttaggaaggtgtgcaatcaccca
gaactgtttgagcgacaagaaacttggtctccatttcacatctccctaaagccataccag
atttcaaagttcctctaccgtcatggacagatcagggtctttaaccactcacgggacagg
tggttacgggttttactttcaccatttgcaccagaccatatccagcagtctctcttccac
aggaagggcatcaatgaagaaagctgtttttctttcctccggtttattgatgtttctcca
gcagaaatggcaaaccttatgaatcagggacacttagccagatggttagctcttttcctg
tctctgaaagcatcctacaggctccatcacatgcgctcctggatggagactgaagaggat
aaagagcagaggtcatgttttctgaggaacagggatttcttgcttgatgtaaatttccca
cttaacttgcacagctgcactttgctgcagaaccttgtgttcagcagccactgtaaagca
gttactggctattcagaccatgtcatatatagaaggagatcagctacctcatgtgtacga
tgctgccaggtgactgagctgccgtccttcctgtgcatagccagtccacgggtaacagct
gtgccgctggagttctactgcaatgaccgaagtgcagaatacgagcgcagggcactaagg
gaaggaggaagtctggaagcaaagcagtgtgtactccatggatcccctgagctagcagct
gactggctcaagcagtgctcccagttcttcccagagcatccaggagggctcttagggatc
aggcctcagaacggctggtcttttatcaggataccagataaagagagtctgatcactgac
agtggaaaacttcatgctcttgatcttctattgacacggctgaaatctcaaggacaccga
gttctcatttactcccagatgacacggatgattgacttactggaggaatacatggtttat
aggaaacatacctacatgagattggatggctcttcaaagatttctgagcgaagggacatg
gtagcagattttcagaacaggaatgatatttttgtgttcctgttaagtacaagagctgga
ggcttgggcattaaccttacagctgcagatacggtcattttctatgacagtgattggaac
ccaacagtagaccagcaagccatggaccgtgcccacaggctgggtcagaccaaacaagtc
accgtgtaccgcctgatttgtaaaggcaccatcgaggagcgcatcctacagcgcgcaaag
gaaaagagcgagattcaacgaatggtaatttcaggtggcaatttcaaacctgacaccttg
aagccaaaagaggtggtcagccttctgctggatgatgaggagctagaaaagaaattgcgt
cagcgtcaagaagagaagcggcagcaagaagaaacaaatcgtgtgaaggaacgtaaacgt
aaaagggaaaaatatgctgagaagaagaagaaggaagatgaattggatgggaagagaaag
aaagagaacatgaaccttgtgatcccatttgttccctcagctgataactccaacctgtct
gctgatggggatgactctttcattagtgtagactctgccatgcccagtcctttcagtgag
atatccatcagcagcgaattacatatgggctctatccctcctgatgagagcagtaatgat
atgcttgtgattgtggatgatccagcttcttcagcacctcagtcaagggcaacaaactct
cctgcttccattactggctcagtttcagacaccgtgaatggcgtttcaatgcaagataca
tctcttgctgccagaggccagtcaagtcgaagccggggtcgtcccaaaggcggctccaag
ggtggcactgggaaaggcaggagccggaagtcgatagcggggagcgcgnnggcggcatac
gcggcctatggctacaacgtctccaaaggcatgtctgcaagtagccctctacaaacagca
atcattcggccttccggacttacagattttggaccttcaaacgcctcttctcccttgagc
tcccctttgagcaaaggaaacagtatttgtgggacccccaaaagtttaaacctgaccagc
agtctcatatcagaaacttcaattcggaagcaaagcaaaggtgcccacacctcaggtggt
cggtag
DBGET
integrated database retrieval system