Geospiza fortis (medium ground-finch): 102037482
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Entry
102037482 CDS
T03755
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102037482 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102037482 (GTF2E1)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
102037482 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
102037482 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
PyrI_C
Motif
Other DBs
NCBI-GeneID:
102037482
NCBI-ProteinID:
XP_005420634
UniProt:
A0A6I9HHT6
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MTDPDVLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPICFSTFTDLEANQLFDPRTGTFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKERAAGAGSGAAAGLAGGHHREA
WTTKGPSYEDLYTQNVVISMEDQEDLSRSAAEGKPARERPIWLRESTVQGAYDPDEIKDG
GRDLDAFQEREESRAALDDNEEVMRALLIHEKKTPSASTVTVSGAAPLSGGNASDSESET
SESEEESPPRPAATATATYGLEEEEEDEEFEVVAEDPTVTVAGRPHSYSQVSQRPELVAQ
MTPEEKEVYIAMGQRMFEDMFD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccagacgtcctcactgaggtcccagcagctctcaagcgccttgccaaatat
gtggtgcgtggcttttatggcatcgagcatgctttggctctggacatcctcatcaggaac
ccctgtgtgaaggaggaggacatgctggaactcctcaagtttgacaggaagcagctcagg
gctgtcctcaacaccctcaagggtgacaagttcatcaaatgcaggatgagggtggagacg
gctcccgatggcaagaccacgcgccataactattactttatcaactaccgcctgctggtc
aacgtggtcaagtacaagctggaccacatgcgccgcaggatcgagaccgatgagagagac
tccaccaaccgcgcctcttttaagtgccccatctgcttcagcactttcacagatctagag
gccaaccagctgtttgaccccaggacaggaactttccgctgtacgttctgcgagactgaa
gtggaggaggatgagtcggccatgcccaagaaggatgcaaggacactggtggcgagattc
aacgagcagattgagcccatctacgcgctgcttcgggagacagaagatgttaacttagcc
tatgaaatcctggagccagaacccacagagattcctgccctgaagcagagcaaggagcgt
gcggccggtgctggttcaggagcagcagctggccttgcagggggacaccatcgggaagca
tggaccacaaagggaccatcatacgaggacttgtacacccagaacgtcgtcatcagcatg
gaggaccaggaggatctgagccggtctgcagctgaaggaaagccagccagagagagaccc
atttggctgcgggagagcacggtgcagggagcttatgaccctgatgaaatcaaagatggg
ggccgggatctggatgcattccaggagcgtgaggagagccgggcagccctggacgacaat
gaggaggtgatgcgtgccctgctcatccacgagaagaagacgccttctgcttccaccgtc
acggtcagcggtgccgctcctctctcgggcggcaacgccagtgactccgagagcgagacc
agcgagtcagaggaggagtcccctccccgccctgccgccacggccaccgcaacgtacggg
ctggaggaggaggaggaggatgaagagttcgaggtggtggcagaagaccccactgtcaca
gtggctgggcgcccgcattcctacagccaagtgagccagcgccccgagctggtggcacag
atgacaccagaggaaaaggaggtttacatagccatggggcagcgcatgttcgaggacatg
ttcgattaa
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