Geospiza fortis (medium ground-finch): 102037497
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Entry
102037497 CDS
T03755
Symbol
RNF43
Name
(RefSeq) ring finger protein 43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102037497 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102037497 (RNF43)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102037497 (RNF43)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102037497 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102037497
NCBI-ProteinID:
XP_005425207
LinkDB
All DBs
Position
Un
AA seq
764 aa
AA seq
DB search
LAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNTSED
EHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLRKPRG
LSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIF
VVRTKCQLNRTQDSVQQQTLQALGQLXXXXARPAPRWDSASSCSSAPVCAICLEEFSEGQ
ELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSGDQAMAASSRLVPQDMEPGRRL
HLFRQHPGHALYHLPQAYPQRNLRSFPPESAHGNPFFHSPELSQLDFGTIHYMPYRPATS
LLACGHVAPLAPGLLGQQHPSPSACRQVLAPHRTCPLQPQPPCVAPKAVTAQKQHRVPTL
RRGLGHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIH
GSCSTFRSSLSSDYDPFVYCSSEGPTTDHGQEQHSHVHYHHHQHHHYRQDAECPPGRAEQ
GSGPRKSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSAVLREAAPSGQPACPQEGQEPP
HAPSTSPNRLDFSVDASRQLGAVPLSPRHSLQSRHHRRKRKCPLELDPALLTKDSAEPGA
CDTHLPPGHPAGYRCSPEAQPLIPSAPLPSGSQPLWKCLVPQSSSELRKQEEGFSGRERN
RSVPADFSGTCTPRHNLSVRIHCPSQQGGQESEEEVQDVHEHSV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ctggcggcggccgtggagtcggagcgggcggcggcgcagaaagccatcatcagggtcatc
ccgctcaaagtggagcccatcatcctggaaggggagttcgccaacgtcgccgaggtgact
ccggccgaagggaaactgctccagtcccacccactatccctgtgcaacaccagcgaggat
gaacacacggaatcgggattcatcaccatcgtcaagctggaacagccggaccgggatccc
aacccctgcctgtccctggccaacaaggcaaaactggcaggggagcgtggagcccgtgcg
atcctttttgacatcaccgatgatgaaagtgctgctgatcagctgaggaagcccagaggc
ctgagccagcctgtggtcctaatcaggggccatgatgctgagctcctcatgggcgttgtg
aacaagaacagagaggcccacgtgaagatagaggtcaaggagccaccagcttggccagac
tacgatgtgtggattcttctcacagtggtcagcactgtggtcgtcatcattttgattttt
gttgtccgcacaaagtgccagctgaacaggactcaggactcggtgcagcagcagaccctg
caggccctggggcagctnnnnnnnnnnngggcgcggccggccccgcgctgggactcggcc
agcagctgcagctccgccccggtctgtgccatctgccttgaggagttcagcgaggggcag
gaactgcggatcatctcgtgctcccacgagttccatcgggagtgtgttgacccttggctg
cagcaacaccacacgtgtccactttgcatgttcaatattcttgccagagactcgggggac
caggccatggctgccagctccaggctggtccctcaggacatggagccagggcggcgactc
caccttttccgccagcatccaggacatgccctttaccacctcccacaagcatatcctcag
aggaacctcaggagttttcccccagagtcagcccatggcaaccccttcttccactctcca
gagctctcccagctggattttggcaccatccactacatgccctacagaccagccacttcc
ctgctggcctgcggccacgtggccccgctggccccaggcttgctggggcagcagcatccc
agcccctctgcatgcaggcaggtgctggcaccacacaggacatgtccccttcagcctcag
cccccctgtgtggcacccaaggcagtcacggcacagaagcagcaccgtgtgcccaccctg
cgccgagggcttggccacgggcaccagcacaacagcagtggctctggggagagctatctc
acggagcacagcgggtacctggccgacgggccgggcagcgactccagctcggggccctgc
catggctcctccagtgactccatgttgaactgcacggatgtcagcctgcagggcatccat
ggcagctgctccacgttccgcagctcccttagcagtgactatgatcccttcgtgtactgc
agctccgagggccccaccacggaccacggtcaggagcagcacagccatgtccactaccac
caccaccagcaccaccactacaggcaggatgcagagtgtccccctgggcgagccgagcag
gggtccgggccacgcaaatcccggtattctggggccaaggttgccttccacagtgctcgg
acacaaaagagaactgagaaaagccatcactctcagcagcctctggaaagcagtgccgtg
ctgcgggaggcagctccatcaggccagccagcctgtccccaggaaggccaggagccccct
cacgccccctccacttctccaaacaggctggacttcagtgtagatgccagcagacaattg
ggagctgtcccgctgtcccccagacacagcttacagagcaggcatcaccgaaggaaaaga
aagtgtcccctggagctcgaccccgctctcctgaccaaggactcagccgagcccggagcc
tgcgacactcaccttcctcccggccatcccgctggctaccgctgctctcccgaagcccag
cccctgatcccaagcgctcccctgcccagcggctcccagccgctctggaagtgtttagtg
ccacagtccagctctgagctgaggaagcaggaggaggggttctcaggacgggagagaaac
cgctcagttcctgcggatttctcagggacgtgcacccccagacacaatctgagcgtccgc
attcactgcccatctcagcagggtggtcaggaatctgaagaggaggtccaggatgtccat
gaacactcagtttaa
DBGET
integrated database retrieval system
