Geospiza fortis (medium ground-finch): 102037500
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Entry
102037500 CDS
T03755
Symbol
SKP2
Name
(RefSeq) S-phase kinase associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04068
FoxO signaling pathway
gfr04110
Cell cycle
gfr04120
Ubiquitin mediated proteolysis
gfr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102037500 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102037500 (SKP2)
04150 mTOR signaling pathway
102037500 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102037500 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102037500 (SKP2)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102037500 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_6
F-box_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
102037500
NCBI-ProteinID:
XP_014164577
UniProt:
A0A6I9ZBW1
LinkDB
All DBs
Position
Un
AA seq
440 aa
AA seq
DB search
MLQGSPSCVCCQSGSTLRASGFCCVCRKHLQEIPSSSTNVSTSLEWDPGKTSELLSGMGV
SALKKDKLGNENTPQDLLVSSPCLPPKRQKVKDNEKDFVIVRRPWLLREAESVWDAXPDE
LLLAIFAYLPLKDLLKVSMICKRWHRLSFDESLWQTLDLTGGNLLPGVLGQLLPAGVTVF
RCPRSCIGDPLFKTSNFLKIQHLDLSNCTVSAADLHSILCLCEKLQNLSLEGLVLSDNII
KSLARNPSLIRLNLCGCSGFSAEALELMLSSCSMLEELNLSWCEFTATHVKAAVSHVTSK
ITQLNLSGYRENLQIADVKTLVERCPLLVHLDLSDSMMLKPECFQYFKQLVFLQHLCLSR
CYQISPAALVELGEIRTLKTLQVFGIVTDSSLQLLEEALPDMKINGSHFTSIARPTVGSK
KNHEIWGIKCRLTLRNPSCL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaggatccccatcctgtgtttgctgtcagtctggcagtacccttagagcctct
gggttttgctgtgtctgcagaaagcacctccaggagatcccatcctctagcactaatgtt
tccaccagcttggaatgggaccccggcaagacctcggagcttctctcgggtatgggagtg
tcggcccttaagaaagacaagctgggcaatgagaacacaccacaggacctgttggtgtcg
tcgccctgtcttcctccaaaaaggcagaaggtgaaggacaatgaaaaggactttgttatc
gtgcgccggccatggctgcttcgagaggcagagtcagtatgggatgcnnntccagatgaa
ttgcttctggcaatctttgcttatttgcccctaaaggatttactgaaagtttctatgatt
tgcaagagatggcatcgactttcatttgatgaatctctctggcagactcttgatttgact
ggtgggaatctgctgccaggagtgcttggacagttgttgcccgcaggtgttactgtgttc
cgctgcccgaggtcttgcattggggatccattgtttaaaacaagcaattttcttaaaatt
cagcacctggatttgtcaaactgcacagtgtctgctgcagatctccacagtattctttgt
ctttgtgaaaagctgcagaacctcagcttggagggtctagtgctttctgacaacatcatc
aaaagccttgctagaaatcccagtttgatacgactaaatctctgtgggtgctcagggttt
tctgcagaagccttggagctgatgttgagcagttgttctatgctggaggagctgaacttg
tcctggtgtgaattcacagccactcacgtcaaagcagcagtcagtcatgttacttcaaag
atcacccagttaaatttaagtggatacagagagaatctacaaatagcagatgtgaaaacg
ctggtggagagatgtcctttgcttgtccatttagatctcagtgacagcatgatgttaaag
cctgaatgtttccagtattttaaacaacttgtattcctacaacacctgtgccttagccga
tgttaccagatatcacctgctgccttagtagagcttggtgaaattcgaacactgaagact
cttcaggtatttggaatagtgactgatagctccctgcagctcctcgaggaagcactaccc
gacatgaagatcaatggttcacactttaccagcattgcaaggccaactgttggcagtaaa
aagaaccatgagatttggggcatcaaatgcagattgacactgagaaatcctagttgcttg
tga
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