Geospiza fortis (medium ground-finch): 102037572
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Entry
102037572 CDS
T03755
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102037572 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102037572 (CSTF3)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102037572 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
102037572
NCBI-ProteinID:
XP_005428553
LinkDB
All DBs
Position
Un
AA seq
772 aa
AA seq
DB search
MVPPGSHPWEDKLRCSYSQFASVPAPVCHDLEEGYLVLCGGSARSTCKTPNNPPVPSQSP
RPESTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSG
RFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQA
YDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQ
LWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQE
AQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSS
KLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNR
LLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALMEYYCSKD
KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW
ARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASELKALG
YKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPV
PGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRIITGGLPE
IAVEGNGPVENNTILNKTVKRSHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggtccccccgggaagtcacccctgggaggacaagttgagatgctcctacagccaattc
gcctctgtgcccgccccggtctgtcacgacctggaggaaggctacctggtgctttgtggg
ggctctgccaggagcacctgtaaaacccccaataatcctccggtgccatcccaatcaccg
cgccccgaatcgactgctgaatatgtgccagaaaaagtgaagaaagctgaaaagaaacta
gaagaaaatccatatgaccttgacgcttggagcattctcattcgagaggcacagaatcag
cctatagacaaagcacggaagacctatgaacgccttgttgcccagttccccagttctggc
agattctggaaactgtacattgaagcagagattaaagcaaaaaattatgacaaggtggaa
aagttatttcagcgctgccttatgaaggttttacacattgatttatggaaatgttacctt
tcctatgtacgagaaaccaaggggaagctacctagttacaaagaaaaaatggctcaggca
tatgattttgctctggataagattggcatggaaatcatgtcataccagatctgggtggat
tacatcaattttttgaaaggcgtagaagcagtaggatcttatgcagaaaaccagaggatc
acagctgtccgtagggtttaccagcgtggttgtgtcaaccccatgataaacatagagcag
ctctggagagattataacaaatatgaagagggcatcaatattcacttagccaagaagatg
atcgaggacaggagtagagattacatgaatgcacgacgtgtggcaaaggaatatgagacg
gtgatgaagggcctggaccgcaacgctccctccgtgcccccacaaaacaccccccaggag
gctcagcaggtggacatgtggaaaaagtacatccagtgggaaaagagcaaccctctacga
acagaagatcaaactctgataacaaaaagagtgatgtttgcctatgagcagtgtctcctg
gtgctgggccatcacccagacatctggtatgaagcagctcagtaccttgagcagtccagc
aagctgctggctgagaaaggggacatgaacaatgctaaacttttcagtgatgaggctgct
aatatttatgaaagagcgatcagcactttattaaagaagaatatgcttctttattttgca
tatgcagattatgaagagagccggatgaagtacgagaaagtgcacagcatctacaaccgg
ctcctggccatcgaggacatcgaccccacactggtttatatccagtacatgaaatttgca
aggcgagcagaaggcattaaatccggaaggacgatatttaagaaagcgagagaggatgcc
cggacccgccaccatgtctatgttactgcagctttaatggagtattattgtagtaaggat
aagtctgtggcctttaagatttttgagctagggctgaaaaaatatggggacattccagaa
tatgtactggcatatatcgactacctttcccaccttaatgaggacaacaatacaagagtt
ttgtttgaacgtgttttaacttcagggagccttccacctgagaaatctggggagatctgg
gctcggtttttagcctttgaaagtaacattggggatctggccagcatcctgaaggtggaa
aaaaggaggtttacagccttcaaggaagaatatgagggcaaagaaacagctctgctggtg
gacaggtacaagttcatggatctgtacccttgctctgccagtgagctgaaggcccttggt
tataaggatgtctcccgtgccaagctagcagcaataattccagaccctgtggttgcacct
tccatcgtgcctgtcctcaaggatgaagtagacaggaaacctgaatatcccaaaccagac
acccagcagatgattccatttcagccaagacacttagcacctccaggtttacatcctgtc
ccgggcggggtatttcctgttccaccagcagctgtagttctcatgaagctcctgccacct
cctatttgttttcagggtccctttgttcaagtggatgagctcatggagatattcagaaga
tgcaaactgccagacactgttgacgaagccgtacggataatcacgggcggcctgcctgag
atagctgtggaaggcaatggacctgtggaaaacaacaccattctcaacaagactgtgaag
agatcacatgaggattctgatgatgatgaggagaaaggatctgtagttccccccgtacat
gacatttacagagcacgacagcaaaagagaatccggtga
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