Geospiza fortis (medium ground-finch): 102037582
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Entry
102037582 CDS
T03755
Symbol
LINGO3
Name
(RefSeq) leucine rich repeat and Ig domain containing 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102037582 (LINGO3)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102037582 (LINGO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRRNT
V-set
LRR_RPS2
LRRCT
Ig_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
102037582
NCBI-ProteinID:
XP_005431105
LinkDB
All DBs
Position
Un
AA seq
601 aa
AA seq
DB search
MPHTMRWWLPLLALLLSPRAGACPARCECAPQLRSVLCHRRRLTAIPEGIPSETRVLELN
KNRIRCLNPGDLAPYPLLEELDFSENIISNVEPGAFSNLFNLQTLRLRGNQLKLIPPGVF
TKLSNLTLLDISENKLVILLDYMFQDLRNLKSLEVGDNDLVYISQRAFSGLLGLEQLTIE
KCNLTSISAESLSYLQNLEVLRLRHLSISALEDQNFKKLYNLLQLEIDNWPLLEEVSPTS
FQGLNLTSLSITYTNITAVPAAALRNLVYLRYLNLSYNPISTVLKGSFKDLIRLQELHIV
GALLVSVEPQAFSGLRQIRLLNLSSNFLSTLEESTFHSVNTLETLRVDRNPLACDCRLLW
ILQRRKTLNFDGQQPMCSSPPEIQGNALRDFPDSVLFEYFTCQKPKIRDRKLQHVTAREG
QSVSFLCRADGEPDPSIAWVSPQHRMITTRSTGRATVLPGGTLEIRFAQVQDSGTYICIA
SNAGGNDTYFATLTVKGRPAEGAHHANRTLYLSDFNDTFHNNTQVFLKFTLDLKTILVST
AMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPTTTTGQGGARKFNMKM
I
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccatgagatggtggctcccgctgctggccctgctgctgtccccgcgggcg
ggcgcgtgccccgcgcgctgcgagtgcgccccgcagctgcgctcggtgctgtgccaccgc
cgccgcctcaccgccatccccgagggcatccccagcgagacacgcgtgctggagctcaac
aagaaccgcatccgctgcctcaaccccggcgacctggccccctacccgctgctggaggag
ctggatttcagcgagaacatcatctccaatgtggagcccggcgccttcagcaacctgttc
aacctgcagaccctgcggctgcgggggaaccagctcaagctcatccccccgggggtcttc
accaagctgagcaacctgaccctgctggacatcagcgagaacaagctggtcatcctgctt
gactacatgttccaggacctgcgcaacctgaagagcctggaggtgggtgacaacgacctg
gtgtacatctcccagcgcgccttctcggggctgctgggcctggagcagctgaccattgag
aagtgtaacctgacctccatctcggccgagtcgctgtcctacctccagaacctggaggtg
ctgcggctccggcacctcagcatctctgcactggaggaccagaacttcaagaagctctac
aacctcctgcagctggagatcgacaactggccactgctggaggaggtgtcccccaccagc
ttccagggcctgaacctcacctcgctctccatcacctacaccaacatcacagccgtgccc
gccgctgccttgaggaacttggtgtacctgcggtacctcaacctgtcctacaaccccatt
agcactgtgctgaagggctccttcaaagacctcatccggctccaggagctccatatcgtg
ggcgctctgctggtgtccgtggagccacaggctttctccggcctgagacagatccggctg
ctcaacctctccagcaacttcctgtccacgctggaggagagcaccttccactcggtcaac
acgctggagacgctgcgggtggacaggaaccccctggcctgcgactgccggctcctctgg
atcctgcagcggcgcaagacgctcaacttcgatgggcagcagcccatgtgctcctcccca
cccgaaatccagggcaacgccctgcgtgacttcccggactcggtgctcttcgagtacttc
acctgccagaagcccaagatccgggatcggaagctgcagcacgtgacggcgcgggaggga
cagtccgtgtccttcctgtgccgcgctgatggggagcccgacccctccatcgcctgggtg
tccccccagcaccgcatgatcaccacccgcagcacgggccgggccacggtgctgcccggg
ggcaccctggaaatccgttttgcccaggtgcaggacagtggcacctacatctgcattgcc
agcaatgccggtggcaatgacacctacttcgccacgctgacggtcaaggggcgcccggcc
gagggcgcccaccacgccaaccggactttgtacctcagcgacttcaacgacaccttccac
aacaacacccaggtcttcttgaagttcaccttggacctcaagaccatcctggtttccacg
gccatgggctgcatcaccttcctgggcgtggtgctcttctgcttcctcctgctcttcgtc
tggagccgcggccgggggcagcacaagaacaacttctccgtggaatattccttccgcaag
gtggatggtcccaccaccaccaccggccagggaggggccaggaagttcaacatgaagatg
atctga
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